RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 BAG1Q99933 345 aaPredicted RBP20.62■□□□□ 0.89
ATG3-208ENST00000495756 DUSP16Q9BY84 665 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 LHX5Q9H2C1 402 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 TLE6Q9H808 572 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 LMCD1Q9NZU5 365 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 HSFX1Q9UBD0 423 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 SLC27A5Q9Y2P5 690 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 PLXNA3P51805 1871 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 SSU72P8A0A1W2PR75 194 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 PER2O15055 1255 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 SEC24AO95486 1093 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 C1RP00736 705 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 PTMAP06454 111 aaKnown RBP20.62■□□□□ 0.89
ATG3-208ENST00000495756 NPR3P17342 541 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 TNFAIP3P21580 790 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 ANXA13P27216 316 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 CACNA2D1P54289 1103 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 BCAT1P54687 386 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 MAPK8IP2Q13387 824 aaPredicted RBP20.62■□□□□ 0.89
ATG3-208ENST00000495756 HABP4Q5JVS0 413 aaKnown RBP20.62■□□□□ 0.89
ATG3-208ENST00000495756 VSTM1Q6UX27 236 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 CYP26C1Q6V0L0 522 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 TRIM72Q6ZMU5 477 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 CLEC20AQ6ZU45 233 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 RBM23Q86U06 439 aaKnown RBP20.62■□□□□ 0.89
ATG3-208ENST00000495756 VPS36Q86VN1 386 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 TMEM139Q8IV31 216 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 LRRC8AQ8IWT6 810 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 TCEAL8Q8IYN2 117 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 PCDHB18PQ96TA0 734 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 NHEJ1Q9H9Q4 299 aaPredicted RBP20.62■□□□□ 0.89
ATG3-208ENST00000495756 TMEM30AQ9NV96 361 aa20.62■□□□□ 0.89
ATG3-208ENST00000495756 SEPT11Q9NVA2 429 aaKnown RBP20.62■□□□□ 0.89
ATG3-208ENST00000495756 REV3LO60673 3130 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 MYH10P35580 1976 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 BEST1O76090 585 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 LSM8O95777 96 aaKnown RBP20.61■□□□□ 0.89
ATG3-208ENST00000495756 SPATA31D3P0C874 917 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 HAPLN1P10915 354 aaPredicted RBP20.61■□□□□ 0.89
ATG3-208ENST00000495756 GPD2P43304 727 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 SLC8A3P57103 927 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 PDE4CQ08493 712 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 BST2Q10589 180 aaKnown RBP20.61■□□□□ 0.89
ATG3-208ENST00000495756 DUSP6Q16828 381 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 GPR153Q6NV75 609 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 SPATA31D4Q6ZUB0 917 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 TMTC1Q8IUR5 882 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 WDTC1Q8N5D0 677 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 SLC22A17Q8WUG5 538 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 SECISBP2LQ93073 1101 aaKnown RBP20.61■□□□□ 0.89
ATG3-208ENST00000495756 PPP2R3CQ969Q6 453 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 FAM161BQ96MY7 647 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 SMOQ99835 787 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 NSUN3Q9H649 340 aaKnown RBP20.61■□□□□ 0.89
ATG3-208ENST00000495756 CYP4F11Q9HBI6 524 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 CSNK1G1Q9HCP0 422 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 ADAMTS1Q9UHI8 967 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 FBXW11Q9UKB1 542 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 CEP83Q9Y592 693 aa20.61■□□□□ 0.89
ATG3-208ENST00000495756 DDX3XO00571 662 aaKnown RBP eCLIP20.6■□□□□ 0.895e-8■■■■□ 19.4
ATG3-208ENST00000495756 SETSIPP0DME0 302 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 ELF1P32519 619 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 CDH5P33151 784 aaPredicted RBP20.6■□□□□ 0.89
ATG3-208ENST00000495756 GRIK1P39086 918 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 NRIP1P48552 1158 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 TUFMP49411 452 aaKnown RBP20.6■□□□□ 0.89
ATG3-208ENST00000495756 MAP3K7CLP57077 242 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 ASTE1Q2TB18 679 aaPredicted RBP20.6■□□□□ 0.89
ATG3-208ENST00000495756 MGAT5BQ3V5L5 792 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 TMEM35BQ8NCS4 154 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 KREMEN2Q8NCW0 462 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 ZMIZ2Q8NF64 920 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 SLC30A5Q8TAD4 765 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 SLC35F5Q8WV83 523 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 CCDC42Q96M95 316 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 KCNK16Q96T55 309 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 SEPT5Q99719 369 aaPredicted RBP20.6■□□□□ 0.89
ATG3-208ENST00000495756 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.6■□□□□ 0.89
ATG3-208ENST00000495756 DEF6Q9H4E7 631 aa20.6■□□□□ 0.89
ATG3-208ENST00000495756 DMAP1Q9NPF5 467 aaPredicted RBP20.6■□□□□ 0.89
ATG3-208ENST00000495756 PRRC2BQ5JSZ5 2229 aaKnown RBP20.59■□□□□ 0.89
ATG3-208ENST00000495756 F8VP50 259 aa20.59■□□□□ 0.89
ATG3-208ENST00000495756 PRRG1O14668 218 aa20.59■□□□□ 0.89
ATG3-208ENST00000495756 CYP1A1P04798 512 aaPredicted RBP20.59■□□□□ 0.89
ATG3-208ENST00000495756 POU3F3P20264 500 aaPredicted RBP20.59■□□□□ 0.89
ATG3-208ENST00000495756 ADGRE1Q14246 886 aa20.59■□□□□ 0.89
ATG3-208ENST00000495756 CLEC16AQ2KHT3 1053 aa20.59■□□□□ 0.89
ATG3-208ENST00000495756 SCN4BQ8IWT1 228 aa20.59■□□□□ 0.89
ATG3-208ENST00000495756 CDCA3Q99618 268 aaPredicted RBP20.59■□□□□ 0.89
ATG3-208ENST00000495756 A0A087X0T9 212 aa20.58■□□□□ 0.89
ATG3-208ENST00000495756 SOWAHDA6NJG2 315 aa20.58■□□□□ 0.89
ATG3-208ENST00000495756 TULP2O00295 520 aa20.58■□□□□ 0.89
ATG3-208ENST00000495756 XPO1O14980 1071 aaKnown RBP20.58■□□□□ 0.89
ATG3-208ENST00000495756 TRIM66O15016 1216 aa20.58■□□□□ 0.89
ATG3-208ENST00000495756 AKR1B10O60218 316 aa20.58■□□□□ 0.89
ATG3-208ENST00000495756 SOAT2O75908 522 aa20.58■□□□□ 0.89
ATG3-208ENST00000495756 FAM228BP0C875 321 aa20.58■□□□□ 0.89
ATG3-208ENST00000495756 UNGP13051 313 aaPredicted RBP20.58■□□□□ 0.89
ATG3-208ENST00000495756 EPCAMP16422 314 aa20.58■□□□□ 0.89
ATG3-208ENST00000495756 KIF11P52732 1056 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms