RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 PTPN2P17706 415 aa18.14■□□□□ 0.49
HDAC6-235ENST00000495515 ADORA2BP29275 332 aa18.14■□□□□ 0.49
HDAC6-235ENST00000495515 KLK7P49862 253 aa18.14■□□□□ 0.49
HDAC6-235ENST00000495515 ZNF132P52740 706 aa18.14■□□□□ 0.49
HDAC6-235ENST00000495515 BPIFB4P59827 614 aa18.14■□□□□ 0.49
HDAC6-235ENST00000495515 MRPS5P82675 430 aaKnown RBP18.14■□□□□ 0.49
HDAC6-235ENST00000495515 DRAP1Q14919 205 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-235ENST00000495515 PTCRAQ6ISU1 281 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-235ENST00000495515 CACNA2D4Q7Z3S7 1137 aa18.14■□□□□ 0.49
HDAC6-235ENST00000495515 C8orf48Q96LL4 319 aa18.14■□□□□ 0.49
HDAC6-235ENST00000495515 NAA15Q9BXJ9 866 aaKnown RBP18.14■□□□□ 0.49
HDAC6-235ENST00000495515 KRT82Q9NSB4 513 aa18.14■□□□□ 0.49
HDAC6-235ENST00000495515 CEP72Q9P209 647 aa18.14■□□□□ 0.49
HDAC6-235ENST00000495515 HESX1Q9UBX0 185 aa18.14■□□□□ 0.49
HDAC6-235ENST00000495515 USP15Q9Y4E8 981 aaPredicted RBP18.14■□□□□ 0.49
HDAC6-235ENST00000495515 RNF225M0QZC1 329 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-235ENST00000495515 FOXN3O00409 490 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-235ENST00000495515 MED7O43513 233 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 SOAT2O75908 522 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 NOL4O94818 638 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 CSH1P0DML2 217 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 CSH2P0DML3 217 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 PLCB2Q00722 1185 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 TFF2Q03403 129 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 PTK2Q05397 1052 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 CBX2Q14781 532 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-235ENST00000495515 DDR2Q16832 855 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 PPP1R26Q5T8A7 1209 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-235ENST00000495515 CYP4A22Q5TCH4 519 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 FMNL3Q8IVF7 1028 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.13■□□□□ 0.49
HDAC6-235ENST00000495515 SUSD6Q92537 303 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 PSMG2Q969U7 264 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 IQCDQ96DY2 449 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 SPATA17Q96L03 361 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 NUP58Q9BVL2 599 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 RBSNQ9H1K0 784 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 ASAH2Q9NR71 780 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 PLXNA3P51805 1871 aa18.13■□□□□ 0.49
HDAC6-235ENST00000495515 F8VP50 259 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 ZNF197O14709 1029 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 FGF19O95750 216 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 ATF6P18850 670 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 GNA15P30679 374 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 STAT1P42224 750 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 CNGA2Q16280 664 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 PABPC1LQ4VXU2 614 aaKnown RBP18.12■□□□□ 0.49
HDAC6-235ENST00000495515 PAQR9Q6ZVX9 377 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 GRASPQ7Z6J2 395 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-235ENST00000495515 DNAJB7Q7Z6W7 309 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-235ENST00000495515 FAM71AQ8IYT1 594 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 ANKRD52Q8NB46 1076 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 GIPC2Q8TF65 315 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 CORO1BQ9BR76 489 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 DUSP16Q9BY84 665 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 EDEM3Q9BZQ6 932 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 XPO4Q9C0E2 1151 aaKnown RBP18.12■□□□□ 0.49
HDAC6-235ENST00000495515 WDR6Q9NNW5 1121 aaKnown RBP18.12■□□□□ 0.49
HDAC6-235ENST00000495515 NLRC4Q9NPP4 1024 aa18.12■□□□□ 0.49
HDAC6-235ENST00000495515 AJAP1Q9UKB5 411 aaPredicted RBP18.12■□□□□ 0.49
HDAC6-235ENST00000495515 GRXCR2A6NFK2 248 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 F8VZ95 297 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 O00370 1275 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 CCDC172P0C7W6 258 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 NPR3P17342 541 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 BCAT1P54687 386 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 SMAD2Q15796 467 aaKnown RBP18.11■□□□□ 0.49
HDAC6-235ENST00000495515 GOLGA7BQ2TAP0 167 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 LCLAT1Q6UWP7 414 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 DENND5BQ6ZUT9 1274 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 PDZD4Q76G19 769 aaPredicted RBP18.11■□□□□ 0.49
HDAC6-235ENST00000495515 GAS2L3Q86XJ1 694 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 CSNK1G1Q9HCP0 422 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 PNPLA8Q9NP80 782 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 AVENQ9NQS1 362 aaPredicted RBP18.11■□□□□ 0.49
HDAC6-235ENST00000495515 DNMT3BQ9UBC3 853 aaKnown RBP18.11■□□□□ 0.49
HDAC6-235ENST00000495515 UXTQ9UBK9 157 aaPredicted RBP18.11■□□□□ 0.49
HDAC6-235ENST00000495515 TSPAN16Q9UKR8 245 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 CLUHO75153 1309 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 PRUNE2Q8WUY3 3088 aa18.11■□□□□ 0.49
HDAC6-235ENST00000495515 SLC38A8A6NNN8 435 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 EPHB6O15197 1021 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 CYP26A1O43174 497 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 THAP12O43422 761 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 RTN3O95197 1032 aaPredicted RBP18.1■□□□□ 0.49
HDAC6-235ENST00000495515 RHOP08100 348 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 BRD2P25440 801 aaKnown RBP18.1■□□□□ 0.49
HDAC6-235ENST00000495515 SOX5P35711 763 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 GPR15P49685 360 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 MAP3K7CLP57077 242 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 MEA1Q16626 185 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 FIGNQ5HY92 759 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 SDHAF4Q5VUM1 108 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 SARM1Q6SZW1 724 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 GPR152Q8TDT2 470 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 ASB2Q96Q27 587 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 GCNAQ96QF7 691 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 SMOQ99835 787 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 GPR88Q9GZN0 384 aa18.1■□□□□ 0.49
HDAC6-235ENST00000495515 MYO6Q9UM54 1294 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms