RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 FAM47CQ5HY64 1035 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 DPP9Q86TI2 863 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 RCOR2Q8IZ40 523 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 TTC8Q8TAM2 541 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 TMC2Q8TDI7 906 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 RXFP2Q8WXD0 754 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 FAM81BQ96LP2 452 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 SLITRK1Q96PX8 696 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 TWNKQ96RR1 684 aa14.08□□□□□ -0.15
GPC1-209ENST00000495100 KBTBD13C9JR72 458 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 I3L4J1 428 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 C4BPAP04003 597 aaKnown RBP14.08□□□□□ -0.16
GPC1-209ENST00000495100 UNGP13051 313 aaPredicted RBP14.08□□□□□ -0.16
GPC1-209ENST00000495100 TBXAS1P24557 533 aaPredicted RBP14.08□□□□□ -0.16
GPC1-209ENST00000495100 ELF1P32519 619 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 FAAP100Q0VG06 881 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 STAT4Q14765 748 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 FAM83AQ86UY5 434 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 ECHDC2Q86YB7 292 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 DNAAF3Q8N9W5 541 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 GPRASP2Q96D09 838 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 SPDL1Q96EA4 605 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 HPDLQ96IR7 371 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 MFSD14AQ96MC6 490 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 FAM161BQ96MY7 647 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 ZNF317Q96PQ6 595 aaPredicted RBP14.08□□□□□ -0.16
GPC1-209ENST00000495100 MINDY3Q9H8M7 445 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 ZNF214Q9UL59 606 aaPredicted RBP14.08□□□□□ -0.16
GPC1-209ENST00000495100 CAPN9O14815 690 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 LIASO43766 372 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 GARTP22102 1010 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 HOXA7P31268 230 aaPredicted RBP14.08□□□□□ -0.16
GPC1-209ENST00000495100 SLC8A1P32418 973 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 PGGT1BP53609 377 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 ROR1Q01973 937 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 CATSPER4Q7RTX7 472 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 CROCCP2Q86T23 111 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 UNC5BQ8IZJ1 945 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 POU5F2Q8N7G0 328 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 USP33Q8TEY7 942 aa14.08□□□□□ -0.16
GPC1-209ENST00000495100 A6NJR5 290 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 A8MXQ7 604 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 ATP9BO43861 1147 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 NCALDP61601 193 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 CACNB2Q08289 660 aaPredicted RBP14.07□□□□□ -0.16
GPC1-209ENST00000495100 VGLL4Q14135 290 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 CCDC142Q17RM4 750 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 ZNF772Q68DY9 489 aaPredicted RBP14.07□□□□□ -0.16
GPC1-209ENST00000495100 JADE1Q6IE81 842 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 NLRP9Q7RTR0 991 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 POLNQ7Z5Q5 900 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 TTC7BQ86TV6 843 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 BBOF1Q8ND07 529 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 C7orf43Q8WVR3 580 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 VTI1AQ96AJ9 217 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 BTBD7Q9P203 1132 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 ZC3H7BQ9UGR2 993 aaKnown RBP14.07□□□□□ -0.16
GPC1-209ENST00000495100 MEI4A8MW99 385 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 LACTBL1A8MY62 500 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 RGL2O15211 777 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 UGT1A9O60656 530 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 CSPG5O95196 566 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 ARIH2O95376 493 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 RPL22P35268 128 aaKnown RBP14.07□□□□□ -0.16
GPC1-209ENST00000495100 ARFIP2P53365 341 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 LMNB2Q03252 620 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 ABHD15Q6UXT9 468 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 MON1BQ7L1V2 547 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 KIAA0319LQ8IZA0 1049 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 DEPDC1BQ8WUY9 529 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 CGRRF1Q99675 332 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 PORCNQ9H237 461 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 UGT1A7Q9HAW7 530 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 UGT1A10Q9HAW8 530 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 UGT1A8Q9HAW9 530 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 USP18Q9UMW8 372 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 H0YCG3 227 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 H3BRJ5 948 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 PLSCR1O15162 318 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 SLC4A1P02730 911 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 STAG3L1P0CL83 205 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 RARBP10826 455 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 DESP17661 470 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 SERPINB3P29508 390 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 NDST1P52848 882 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 SIX1Q15475 284 aaPredicted RBP14.07□□□□□ -0.16
GPC1-209ENST00000495100 NXNQ6DKJ4 435 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 ENOSF1Q7L5Y1 443 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 RNPEPQ9H4A4 650 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 GOLGA2P5Q9HBQ8 144 aa14.07□□□□□ -0.16
GPC1-209ENST00000495100 BRCA2P51587 3418 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 CCDC160A6NGH7 325 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 CFLARO15519 480 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 ADCY3O60266 1144 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 HMGCRP04035 888 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 RBL1P28749 1068 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 RASSF2P50749 326 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 NFIL3Q16649 462 aa14.06□□□□□ -0.16
GPC1-209ENST00000495100 CTU1Q7Z7A3 348 aaKnown RBP14.06□□□□□ -0.16
GPC1-209ENST00000495100 ATP11CQ8NB49 1132 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms