RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 TERB1Q8NA31 727 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 R3HDM4Q96D70 268 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 TTYH3Q9C0H2 523 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 FEZ2Q9UHY8 353 aaPredicted RBP5.1□□□□□ -1.59
VPS50-219ENST00000495039 MCM8Q9UJA3 840 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 PCDHGA9Q9Y5G4 932 aaKnown RBP5.1□□□□□ -1.59
VPS50-219ENST00000495039 PCDHGA8Q9Y5G5 932 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 PCDHGA7Q9Y5G6 932 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 PCDHGA6Q9Y5G7 932 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 PCDHGA3Q9Y5H0 932 aa5.1□□□□□ -1.59
VPS50-219ENST00000495039 LY6G6EA0A0G2JKS1 128 aa5.09□□□□□ -1.59
VPS50-219ENST00000495039 TLDC2A0PJX2 215 aa5.09□□□□□ -1.59
VPS50-219ENST00000495039 DLDP09622 509 aaKnown RBP5.09□□□□□ -1.59
VPS50-219ENST00000495039 KRT85P78386 507 aa5.09□□□□□ -1.59
VPS50-219ENST00000495039 C10orf25Q5T742 122 aa5.09□□□□□ -1.59
VPS50-219ENST00000495039 THEMIS2Q5TEJ8 643 aa5.09□□□□□ -1.59
VPS50-219ENST00000495039 MEX3CQ5U5Q3 659 aaKnown RBP5.09□□□□□ -1.59
VPS50-219ENST00000495039 MRPL46Q9H2W6 279 aaKnown RBP5.09□□□□□ -1.59
VPS50-219ENST00000495039 PCDHA3Q9Y5H8 950 aa5.09□□□□□ -1.59
VPS50-219ENST00000495039 DCLK1O15075 740 aa5.08□□□□□ -1.6
VPS50-219ENST00000495039 SLC16A6O15403 523 aa5.08□□□□□ -1.6
VPS50-219ENST00000495039 PDE8BO95263 885 aa5.08□□□□□ -1.6
VPS50-219ENST00000495039 MYBL2P10244 700 aa5.08□□□□□ -1.6
VPS50-219ENST00000495039 PRF1P14222 555 aa5.08□□□□□ -1.6
VPS50-219ENST00000495039 KCNJ5P48544 419 aa5.08□□□□□ -1.6
VPS50-219ENST00000495039 THBS3P49746 956 aa5.08□□□□□ -1.6
VPS50-219ENST00000495039 RENBPP51606 427 aa5.08□□□□□ -1.6
VPS50-219ENST00000495039 ADKP55263 362 aaKnown RBP5.08□□□□□ -1.6
VPS50-219ENST00000495039 E2F2Q14209 437 aa5.08□□□□□ -1.6
VPS50-219ENST00000495039 IQCB1Q15051 598 aa5.08□□□□□ -1.6
VPS50-219ENST00000495039 RGS7BPQ6MZT1 257 aaPredicted RBP5.08□□□□□ -1.6
VPS50-219ENST00000495039 THAP7Q9BT49 309 aaPredicted RBP5.08□□□□□ -1.6
VPS50-219ENST00000495039 ABCF2Q9UG63 623 aa5.08□□□□□ -1.6
VPS50-219ENST00000495039 ADAM10O14672 748 aa5.07□□□□□ -1.6
VPS50-219ENST00000495039 ERC2O15083 957 aa5.07□□□□□ -1.6
VPS50-219ENST00000495039 LILRA4P59901 499 aa5.07□□□□□ -1.6
VPS50-219ENST00000495039 GHRHRQ02643 423 aa5.07□□□□□ -1.6
VPS50-219ENST00000495039 NOGQ13253 232 aa5.07□□□□□ -1.6
VPS50-219ENST00000495039 ABCB5Q2M3G0 1257 aa5.07□□□□□ -1.6
VPS50-219ENST00000495039 TRIM71Q2Q1W2 868 aaKnown RBP5.07□□□□□ -1.6
VPS50-219ENST00000495039 L1TD1Q5T7N2 865 aaKnown RBP5.07□□□□□ -1.6
VPS50-219ENST00000495039 HEATR3Q7Z4Q2 680 aa5.07□□□□□ -1.6
VPS50-219ENST00000495039 ACRBPQ8NEB7 543 aa5.07□□□□□ -1.6
VPS50-219ENST00000495039 LYZL4Q96KX0 146 aa5.07□□□□□ -1.6
VPS50-219ENST00000495039 FAM126AQ9BYI3 521 aaPredicted RBP5.07□□□□□ -1.6
VPS50-219ENST00000495039 CIPCQ9C0C6 399 aa5.07□□□□□ -1.6
VPS50-219ENST00000495039 VPS33BQ9H267 617 aa5.07□□□□□ -1.6
VPS50-219ENST00000495039 TFCP2L1Q9NZI6 479 aa5.07□□□□□ -1.6
VPS50-219ENST00000495039 GABRQQ9UN88 632 aa5.07□□□□□ -1.6
VPS50-219ENST00000495039 FAM90A8PA6NJQ4 464 aa5.06□□□□□ -1.6
VPS50-219ENST00000495039 CD8B2A6NJW9 211 aa5.06□□□□□ -1.6
VPS50-219ENST00000495039 ALPLP05186 524 aa5.06□□□□□ -1.6
VPS50-219ENST00000495039 FAM90A13PP0C7W8 464 aa5.06□□□□□ -1.6
VPS50-219ENST00000495039 FAM90A24PP0C7X0 464 aa5.06□□□□□ -1.6
VPS50-219ENST00000495039 SYDE2Q5VT97 1194 aa5.06□□□□□ -1.6
VPS50-219ENST00000495039 SOCS4Q8WXH5 440 aa5.06□□□□□ -1.6
VPS50-219ENST00000495039 MOGAT1Q96PD6 335 aa5.06□□□□□ -1.6
VPS50-219ENST00000495039 LENG8Q96PV6 779 aaPredicted RBP5.06□□□□□ -1.6
VPS50-219ENST00000495039 FYTTD1Q96QD9 318 aaKnown RBP5.06□□□□□ -1.6
VPS50-219ENST00000495039 EFHD1Q9BUP0 239 aa5.06□□□□□ -1.6
VPS50-219ENST00000495039 FOXP1Q9H334 677 aaPredicted RBP5.06□□□□□ -1.6
VPS50-219ENST00000495039 PI4KBQ9UBF8 816 aa5.06□□□□□ -1.6
VPS50-219ENST00000495039 ZNF112Q9UJU3 913 aa5.06□□□□□ -1.6
VPS50-219ENST00000495039 NDRG4Q9ULP0 352 aaKnown RBP5.06□□□□□ -1.6
VPS50-219ENST00000495039 TMA7Q9Y2S6 64 aaKnown RBP5.06□□□□□ -1.6
VPS50-219ENST00000495039 TMEM232C9JQI7 657 aa5.05□□□□□ -1.6
VPS50-219ENST00000495039 ABLIM3O94929 683 aa5.05□□□□□ -1.6
VPS50-219ENST00000495039 CLSTN1O94985 981 aa5.05□□□□□ -1.6
VPS50-219ENST00000495039 A1BGP04217 495 aa5.05□□□□□ -1.6
VPS50-219ENST00000495039 PRKCBP05771 671 aa5.05□□□□□ -1.6
VPS50-219ENST00000495039 HK3P52790 923 aa5.05□□□□□ -1.6
VPS50-219ENST00000495039 SEMA3AQ14563 771 aa5.05□□□□□ -1.6
VPS50-219ENST00000495039 FAM187BQ17R55 369 aa5.05□□□□□ -1.6
VPS50-219ENST00000495039 EFCAB2Q5VUJ9 269 aa5.05□□□□□ -1.6
VPS50-219ENST00000495039 SDE2Q6IQ49 451 aa5.05□□□□□ -1.6
VPS50-219ENST00000495039 DLK2Q6UY11 383 aa5.05□□□□□ -1.6
VPS50-219ENST00000495039 C9orf47Q6ZRZ4 202 aa5.05□□□□□ -1.6
VPS50-219ENST00000495039 TMX1Q9H3N1 280 aa5.05□□□□□ -1.6
VPS50-219ENST00000495039 SHTN1A0MZ66 631 aa5.04□□□□□ -1.6
VPS50-219ENST00000495039 DTNBO60941 627 aa5.04□□□□□ -1.6
VPS50-219ENST00000495039 AHSGP02765 367 aa5.04□□□□□ -1.6
VPS50-219ENST00000495039 ALDH5A1P51649 535 aaPredicted RBP5.04□□□□□ -1.6
VPS50-219ENST00000495039 NANOS2P60321 138 aaKnown RBP5.04□□□□□ -1.6
VPS50-219ENST00000495039 SATB1Q01826 763 aa5.04□□□□□ -1.6
VPS50-219ENST00000495039 AMOTQ4VCS5 1084 aa5.04□□□□□ -1.6
VPS50-219ENST00000495039 PNMA8AQ86V59 439 aaPredicted RBP5.04□□□□□ -1.6
VPS50-219ENST00000495039 PPP1R3BQ86XI6 285 aa5.04□□□□□ -1.6
VPS50-219ENST00000495039 ADAMTS18Q8TE60 1221 aa5.04□□□□□ -1.6
VPS50-219ENST00000495039 FAM167AQ96KS9 214 aa5.04□□□□□ -1.6
VPS50-219ENST00000495039 DPCDQ9BVM2 203 aaPredicted RBP5.04□□□□□ -1.6
VPS50-219ENST00000495039 SHOC2Q9UQ13 582 aa5.04□□□□□ -1.6
VPS50-219ENST00000495039 PRKAB1Q9Y478 270 aa5.04□□□□□ -1.6
VPS50-219ENST00000495039 FNDC1Q4ZHG4 1894 aaPredicted RBP5.04□□□□□ -1.6
VPS50-219ENST00000495039 TCRBV5S1A1TA0A578 114 aa5.03□□□□□ -1.6
VPS50-219ENST00000495039 BTBD19C9JJ37 291 aa5.03□□□□□ -1.6
VPS50-219ENST00000495039 FZD9O00144 591 aa5.03□□□□□ -1.6
VPS50-219ENST00000495039 RNF8O76064 485 aa5.03□□□□□ -1.6
VPS50-219ENST00000495039 HOXD9P28356 352 aaPredicted RBP5.03□□□□□ -1.6
VPS50-219ENST00000495039 HTR6P50406 440 aa5.03□□□□□ -1.6
VPS50-219ENST00000495039 PDE6CP51160 858 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms