RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 THAP9Q9H5L6 903 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 SORCS3Q9UPU3 1222 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 NCANO14594 1321 aa18.22■□□□□ 0.51
SNX17-209ENST00000494893 SMTNL1A8MU46 457 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 F8VP50 259 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 P4HA2O15460 535 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 TADA3O75528 432 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 F11P03951 625 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 GABRR2P28476 465 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 CUL2Q13617 745 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 VEPH1Q14D04 833 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 HSP90AA4PQ58FG1 418 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 WDR44Q5JSH3 913 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 ARHGEF19Q8IW93 802 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 AOPEPQ8N6M6 819 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 ENOX1Q8TC92 643 aaKnown RBP18.21■□□□□ 0.51
SNX17-209ENST00000494893 EDAQ92838 391 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 KAT5Q92993 513 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 TNIP3Q96KP6 325 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 CISHQ9NSE2 258 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 SAMSN1Q9NSI8 373 aaKnown RBP18.21■□□□□ 0.51
SNX17-209ENST00000494893 GDE1Q9NZC3 331 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 IGSF9Q9P2J2 1179 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 NUMBLQ9Y6R0 609 aa18.21■□□□□ 0.51
SNX17-209ENST00000494893 BECN2A8MW95 431 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 NARSO43776 548 aaKnown RBP18.2■□□□□ 0.5
SNX17-209ENST00000494893 CSH1P0DML2 217 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 CSH2P0DML3 217 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 ALADP13716 330 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 USP46P62068 366 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 CYP4F8P98187 520 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 MYL5Q02045 173 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 NCAPHQ15003 741 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 FAM78AQ5JUQ0 283 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 SLC44A3Q8N4M1 653 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 SLC4A11Q8NBS3 891 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 EHBP1Q8NDI1 1231 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 ZMIZ2Q8NF64 920 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 SLC2A14Q8TDB8 520 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 SPATA17Q96L03 361 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 C8orf48Q96LL4 319 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 MYRFLQ96LU7 910 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 NT5C1AQ9BXI3 368 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 PLA2G2FQ9BZM2 168 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 GRPEL1Q9HAV7 217 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 FAM49BQ9NUQ9 324 aa18.2■□□□□ 0.5
SNX17-209ENST00000494893 FAM86C2PA6NEL3 165 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 BEST1O76090 585 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 ACO1P21399 889 aaKnown RBP18.19■□□□□ 0.5
SNX17-209ENST00000494893 GRIK1P39086 918 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 MRE11P49959 708 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 RAD23BP54727 409 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 TDGQ13569 410 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 ZNF394Q53GI3 561 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 TANGO2Q6ICL3 276 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 RSPRY1Q96DX4 576 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 TRMT2BQ96GJ1 504 aaKnown RBP18.19■□□□□ 0.5
SNX17-209ENST00000494893 ASB16Q96NS5 453 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 KCNK16Q96T55 309 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 SMOQ99835 787 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 KXD1Q9BQD3 176 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 INTS2Q9H0H0 1204 aaKnown RBP18.19■□□□□ 0.5
SNX17-209ENST00000494893 ATXN3LQ9H3M9 355 aa18.19■□□□□ 0.5
SNX17-209ENST00000494893 MAGED2Q9UNF1 606 aaPredicted RBP18.19■□□□□ 0.5
SNX17-209ENST00000494893 GOLGA6L19H0YKK7 550 aa18.18■□□□□ 0.5
SNX17-209ENST00000494893 APBA1Q02410 837 aa18.18■□□□□ 0.5
SNX17-209ENST00000494893 TPD52L1Q16890 204 aaPredicted RBP18.18■□□□□ 0.5
SNX17-209ENST00000494893 MIIPQ5JXC2 388 aa18.18■□□□□ 0.5
SNX17-209ENST00000494893 PHLDB3Q6NSJ2 640 aa18.18■□□□□ 0.5
SNX17-209ENST00000494893 CREBRFQ8IUR6 639 aa18.18■□□□□ 0.5
SNX17-209ENST00000494893 NXPE3Q969Y0 559 aa18.18■□□□□ 0.5
SNX17-209ENST00000494893 ASIC4Q96FT7 647 aa18.18■□□□□ 0.5
SNX17-209ENST00000494893 KREMEN1Q96MU8 473 aa18.18■□□□□ 0.5
SNX17-209ENST00000494893 NT5C1BQ96P26 610 aa18.18■□□□□ 0.5
SNX17-209ENST00000494893 HNRNPABQ99729 332 aaKnown RBP18.18■□□□□ 0.5
SNX17-209ENST00000494893 TTLL2Q9BWV7 592 aa18.18■□□□□ 0.5
SNX17-209ENST00000494893 DUSP12Q9UNI6 340 aa18.18■□□□□ 0.5
SNX17-209ENST00000494893 NFE2L3Q9Y4A8 694 aa18.18■□□□□ 0.5
SNX17-209ENST00000494893 TNFRSF10BO14763 440 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 TRIM66O15016 1216 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 FGF19O95750 216 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 ADORA2BP29275 332 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 CDC25CP30307 473 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 MTIF2P46199 727 aaKnown RBP18.17■□□□□ 0.5
SNX17-209ENST00000494893 TAF12Q16514 161 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 GPR158Q5T848 1215 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 PPP1R26Q5T8A7 1209 aaPredicted RBP18.17■□□□□ 0.5
SNX17-209ENST00000494893 CDKAL1Q5VV42 579 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 TRIM67Q6ZTA4 783 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 RRAGAQ7L523 313 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 GPIHBP1Q8IV16 184 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 ZSCAN18Q8TBC5 510 aaPredicted RBP18.17■□□□□ 0.5
SNX17-209ENST00000494893 SMARCD2Q92925 531 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 CYFIP2Q96F07 1278 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 SMARCD1Q96GM5 515 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 TMEM176AQ96HP8 235 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 CRACR2AQ9BSW2 395 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 MED10Q9BTT4 135 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 SLC46A2Q9BY10 475 aa18.17■□□□□ 0.5
SNX17-209ENST00000494893 TRPV4Q9HBA0 871 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms