RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 USP6NLQ92738 828 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 ADPGKQ9BRR6 497 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 CALCOCO1Q9P1Z2 691 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.95□□□□□ -0.66
SAMM50-206ENST00000494795 PASKQ96RG2 1323 aa10.95□□□□□ -0.66
SAMM50-206ENST00000494795 hCG_1818297A0A087WSY0 165 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 SMIM28A0A1B0GU29 152 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 SIGLEC16A6NMB1 481 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 LIASO43766 372 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 IFNB1P01574 187 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 ACAT1P24752 427 aaKnown RBP10.94□□□□□ -0.66
SAMM50-206ENST00000494795 ADORA2BP29275 332 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 CCT5P48643 541 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 YWHAEP62258 255 aaKnown RBP10.94□□□□□ -0.66
SAMM50-206ENST00000494795 IFFO1Q0D2I5 559 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 ZBTB6Q15916 424 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 P3H1Q32P28 736 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 SLC27A1Q6PCB7 646 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 IFNL1Q8IU54 200 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 SMG8Q8ND04 991 aaKnown RBP10.94□□□□□ -0.66
SAMM50-206ENST00000494795 KHSRPQ92945 711 aaKnown RBP eCLIP10.94□□□□□ -0.669e-6■■■□□ 17.9
SAMM50-206ENST00000494795 PAAF1Q9BRP4 392 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 TMPRSS4Q9NRS4 437 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 RASAL2Q9UJF2 1139 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 BARX2Q9UMQ3 279 aaPredicted RBP10.94□□□□□ -0.66
SAMM50-206ENST00000494795 COL1A2P08123 1366 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 LOC102724159A0A0B4J2E5 919 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 CLDN5O00501 218 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 PODXLO00592 558 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 KLRC2P26717 231 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 DRG2P55039 364 aaKnown RBP10.94□□□□□ -0.66
SAMM50-206ENST00000494795 RBP5P82980 135 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 PWP2Q15269 919 aaKnown RBP10.94□□□□□ -0.66
SAMM50-206ENST00000494795 CA9Q16790 459 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 ZC3H12AQ5D1E8 599 aaKnown RBP10.94□□□□□ -0.66
SAMM50-206ENST00000494795 OR6B2Q6IFH4 312 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 ALKAL1Q6UXT8 129 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 GSTA5Q7RTV2 222 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 EIF1ADQ8N9N8 165 aaKnown RBP10.94□□□□□ -0.66
SAMM50-206ENST00000494795 OR6B3Q8NGW1 331 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 KBTBD7Q8WVZ9 684 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 GCOM2Q9BZD3 368 aaPredicted RBP10.94□□□□□ -0.66
SAMM50-206ENST00000494795 TRIM6Q9C030 488 aaPredicted RBP10.94□□□□□ -0.66
SAMM50-206ENST00000494795 MLXIPLQ9NP71 852 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 PPANQ9NQ55 473 aaKnown RBP10.94□□□□□ -0.66
SAMM50-206ENST00000494795 TIMM13Q9Y5L4 95 aaPredicted RBP10.94□□□□□ -0.66
SAMM50-206ENST00000494795 NRCAMQ92823 1304 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 HSPA6P17066 643 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 FKBP1BP68106 108 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 CYP4X1Q8N118 509 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 BCAS4Q8TDM0 211 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 LHX5Q9H2C1 402 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 ZNF148Q9UQR1 794 aa10.94□□□□□ -0.66
SAMM50-206ENST00000494795 TCRBV7S3A2A0A539 114 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 EIF3HO15372 352 aaKnown RBP eCLIP10.93□□□□□ -0.66
SAMM50-206ENST00000494795 CST8O60676 142 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 BEST1O76090 585 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 TKTP29401 623 aaKnown RBP10.93□□□□□ -0.66
SAMM50-206ENST00000494795 PURAQ00577 322 aaKnown RBP10.93□□□□□ -0.66
SAMM50-206ENST00000494795 PLCB3Q01970 1234 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 ANKRD22Q5VYY1 191 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 C9orf57Q5W0N0 161 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 KDM7AQ6ZMT4 941 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 ATL2Q8NHH9 583 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 RXFP2Q8WXD0 754 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 TRIB2Q92519 343 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 MRRFQ96E11 262 aaKnown RBP10.93□□□□□ -0.66
SAMM50-206ENST00000494795 TBK1Q9UHD2 729 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 SLC12A6Q9UHW9 1150 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 C2CD2Q9Y426 696 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 BPTFQ12830 3046 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 HAS3O00219 553 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 TNPO2O14787 897 aaKnown RBP10.93□□□□□ -0.66
SAMM50-206ENST00000494795 LSP1P33241 339 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 PITX1P78337 314 aaPredicted RBP10.93□□□□□ -0.66
SAMM50-206ENST00000494795 OTUD4Q01804 1114 aaKnown RBP10.93□□□□□ -0.66
SAMM50-206ENST00000494795 INCA1Q0VD86 236 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 PTK6Q13882 451 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 CNGA2Q16280 664 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 FSCN1Q16658 493 aaKnown RBP10.93□□□□□ -0.66
SAMM50-206ENST00000494795 ODF2Q5BJF6 829 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 IZUMO3Q5VZ72 239 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 ZNF410Q86VK4 478 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 ACTL9Q8TC94 416 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 NT5C1AQ9BXI3 368 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 CALN1Q9BXU9 219 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 MIOSQ9NXC5 875 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 PCDH10Q9P2E7 1040 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 ITGA11Q9UKX5 1188 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 IPPQ9Y573 584 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 CEP83Q9Y592 693 aa10.93□□□□□ -0.66
SAMM50-206ENST00000494795 FAM155AB1AL88 458 aaPredicted RBP10.92□□□□□ -0.66
SAMM50-206ENST00000494795 PAPSS1O43252 624 aaPredicted RBP10.92□□□□□ -0.66
SAMM50-206ENST00000494795 PAEPP09466 180 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 SKOR1P84550 965 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 BYSLQ13895 437 aaKnown RBP10.92□□□□□ -0.66
SAMM50-206ENST00000494795 CCNG2Q16589 344 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 QPCTQ16769 361 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 KIAA0319Q5VV43 1072 aa10.92□□□□□ -0.66
SAMM50-206ENST00000494795 DENND2CQ68D51 928 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms