RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 PHBP35232 272 aa16.09■□□□□ 0.17
SDF4-207ENST00000494748 RPL22P35268 128 aaKnown RBP16.09■□□□□ 0.17
SDF4-207ENST00000494748 ACTR3P61158 418 aa16.09■□□□□ 0.17
SDF4-207ENST00000494748 AOC3Q16853 763 aa16.09■□□□□ 0.17
SDF4-207ENST00000494748 IZUMO2Q6UXV1 221 aa16.09■□□□□ 0.17
SDF4-207ENST00000494748 RNF111Q6ZNA4 994 aa16.09■□□□□ 0.17
SDF4-207ENST00000494748 SPATA16Q9BXB7 569 aa16.09■□□□□ 0.17
SDF4-207ENST00000494748 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.09■□□□□ 0.17
SDF4-207ENST00000494748 ATP2A1O14983 1001 aa16.08■□□□□ 0.17
SDF4-207ENST00000494748 ZCCHC18P0CG32 403 aa16.08■□□□□ 0.17
SDF4-207ENST00000494748 CDC16Q13042 620 aa16.08■□□□□ 0.17
SDF4-207ENST00000494748 CUL2Q13617 745 aa16.08■□□□□ 0.17
SDF4-207ENST00000494748 SAMD3Q8N6K7 520 aa16.08■□□□□ 0.17
SDF4-207ENST00000494748 EZH1Q92800 747 aaPredicted RBP16.08■□□□□ 0.17
SDF4-207ENST00000494748 FAM161BQ96MY7 647 aa16.08■□□□□ 0.17
SDF4-207ENST00000494748 UBE2OQ9C0C9 1292 aaKnown RBP16.08■□□□□ 0.17
SDF4-207ENST00000494748 DBNDD1Q9H9R9 158 aa16.08■□□□□ 0.17
SDF4-207ENST00000494748 DMAP1Q9NPF5 467 aaPredicted RBP16.08■□□□□ 0.17
SDF4-207ENST00000494748 FBXO28Q9NVF7 368 aa16.08■□□□□ 0.17
SDF4-207ENST00000494748 SLC7A8Q9UHI5 535 aa16.08■□□□□ 0.17
SDF4-207ENST00000494748 ZNF541Q9H0D2 1346 aa16.08■□□□□ 0.17
SDF4-207ENST00000494748 TM7SF2O76062 418 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 IFNB1P01574 187 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 PIM1P11309 404 aaPredicted RBP16.08■□□□□ 0.16
SDF4-207ENST00000494748 CUL3Q13618 768 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 HNRNPDQ14103 355 aaKnown RBP16.08■□□□□ 0.16
SDF4-207ENST00000494748 TRMT1LQ7Z2T5 733 aaKnown RBP16.08■□□□□ 0.16
SDF4-207ENST00000494748 TMPRSS6Q8IU80 811 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 UBR7Q8N806 425 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 PPFIBP2Q8ND30 876 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 HAPLN2Q9GZV7 340 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 DCAF8L1A6NGE4 600 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 B2RBV5 119 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 H3BRJ5 948 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 USP1O94782 785 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 ZNF132P52740 706 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 FAAP100Q0VG06 881 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 DACT2Q5SW24 774 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 CCDC62Q6P9F0 684 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 TMEM270Q6UE05 265 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 PCGF5Q86SE9 256 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 ULK2Q8IYT8 1036 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 SLC44A1Q8WWI5 657 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 CLEC4DQ8WXI8 215 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 HAPLN3Q96S86 360 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 KMT5AQ9NQR1 393 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 ARHGAP28Q9P2N2 729 aa16.08■□□□□ 0.16
SDF4-207ENST00000494748 PYGBP11216 843 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 GARTP22102 1010 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 ZBTB16Q05516 673 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 DMP1Q13316 513 aaPredicted RBP16.07■□□□□ 0.16
SDF4-207ENST00000494748 TEX44Q53QW1 395 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 XKR9Q5GH70 373 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 ARFGAP1Q8N6T3 406 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 TTC17Q96AE7 1141 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 CCDC106Q9BWC9 280 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 DNAJB4Q9UDY4 337 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 ANGPTL2Q9UKU9 493 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 NFIBO00712 420 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 FAM155BO75949 473 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 STBD1O95210 358 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 SPATA31D3P0C874 917 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 DSG1Q02413 1049 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 PSMD6Q15008 389 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 TAZQ16635 292 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 BRDTQ58F21 947 aaPredicted RBP16.07■□□□□ 0.16
SDF4-207ENST00000494748 SPATA31D4Q6ZUB0 917 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 AGBL1Q96MI9 1066 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 MCEEQ96PE7 176 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 ZNF395Q9H8N7 513 aaPredicted RBP16.07■□□□□ 0.16
SDF4-207ENST00000494748 CPOXP36551 454 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 GRIA2P42262 883 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 CDK7P50613 346 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 OTUD4Q01804 1114 aaKnown RBP16.07■□□□□ 0.16
SDF4-207ENST00000494748 PTK7Q13308 1070 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 SEPT7Q16181 437 aaKnown RBP16.07■□□□□ 0.16
SDF4-207ENST00000494748 RAPH1Q70E73 1250 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 SCUBE1Q8IWY4 988 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 ACTL9Q8TC94 416 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 ANKEF1Q9NU02 776 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 KCNK4Q9NYG8 393 aa16.07■□□□□ 0.16
SDF4-207ENST00000494748 TCRBV9S1A1TA0A576 114 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 PLA2G6O60733 806 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 ENO1P06733 434 aaKnown RBP16.06■□□□□ 0.16
SDF4-207ENST00000494748 NRLP54845 237 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
SDF4-207ENST00000494748 NIPA2Q8N8Q9 360 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 CCDC110Q8TBZ0 833 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 CCDC28BQ9BUN5 200 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 MECRQ9BV79 373 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 C20orf27Q9GZN8 174 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 TDRD3Q9H7E2 651 aaKnown RBP16.06■□□□□ 0.16
SDF4-207ENST00000494748 PLAC1Q9HBJ0 212 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 NUB1Q9Y5A7 615 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 PCDHB4Q9Y5E5 795 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 MGAMO43451 1857 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 IRF6O14896 467 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 MT-ND3P03897 115 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 TSHRP16473 764 aa16.06■□□□□ 0.16
SDF4-207ENST00000494748 ERFP50548 548 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms