RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 TSG101Q99816 390 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CTRCQ99895 268 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 DDX50Q9BQ39 737 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 PSD2Q9BQI7 771 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 HEPHQ9BQS7 1158 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 HAUS8Q9BT25 410 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 LSM14BQ9BX40 385 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 AP1M1Q9BXS5 423 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 PACSIN1Q9BY11 444 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CNTNAP3Q9BZ76 1288 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 IMPG2Q9BZV3 1241 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 NDEL1Q9GZM8 345 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ERVK-5Q9HDB9 667 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 FAM207AQ9NSI2 230 aaPredicted RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 TYW1Q9NV66 732 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 HOXC10Q9NYD6 342 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CLIC5Q9NZA1 410 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.86□□□□□ -1.95
MDC1-208ENST00000494654 WHRNQ9P202 907 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 IGSF9Q9P2J2 1179 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ANKFY1Q9P2R3 1169 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 KLHL3Q9UH77 587 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 AMFRQ9UKV5 643 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 CDH7Q9ULB5 785 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ASAP1Q9ULH1 1129 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 RABL2BQ9UNT1 228 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 KCNJ14Q9UNX9 436 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 PLA2G4CQ9UP65 541 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 PRELID1Q9Y255 219 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 B3GNT3Q9Y2A9 372 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ZNF652Q9Y2D9 606 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TDRKHQ9Y2W6 561 aaKnown RBP2.86□□□□□ -1.95
MDC1-208ENST00000494654 COQ6Q9Y2Z9 468 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 TRIM17Q9Y577 477 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 PCDHA3Q9Y5H8 950 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 NOX1Q9Y5S8 564 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 SLC12A7Q9Y666 1083 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 SLC30A1Q9Y6M5 507 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 SQORQ9Y6N5 450 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 SCN9AQ15858 1988 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ZNF536O15090 1300 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ZNF532Q9HCE3 1301 aa2.86□□□□□ -1.95
MDC1-208ENST00000494654 ALPK3Q96L96 1907 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 COL11A2P13942 1736 aaPredicted RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 ADAMTSL1Q8N6G6 1762 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 A0A087X0T9 212 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ANKRD34BA5PLL1 514 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 CCDC160A6NGH7 325 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 TMEM88BA6NKF7 163 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 RSPH10B2B2RC85 870 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 B4E1Z4 1266 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 RASA4BC9J798 803 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 UBE2Q2LH0YL09 131 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 K7EPI3 171 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 CDK2AP1O14519 115 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 SLC22A1O15245 554 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 AQP9O43315 295 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 RASA4O43374 803 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 LZTS3O60299 673 aaPredicted RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 CCNT2O60583 730 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 TBCAO75347 108 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 IDH1O75874 414 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 RSL1D1O76021 490 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 DDAH1O94760 285 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 USP1O94782 785 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 NOL4O94818 638 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 CAMTA2O94983 1202 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 TGDSO95455 350 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ESRRBO95718 433 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 FGGP02679 453 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 TMEM253P0C7T8 217 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 FAM228BP0C875 321 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 RSPH10BP0C881 870 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 CALM1P0DP23 149 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 CALM2P0DP24 149 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 CALM3P0DP25 149 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 VSIG8P0DPA2 414 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 UBL4AP11441 157 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ESRRAP11474 423 aaPredicted RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 KRT13P13646 458 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 CREB1P16220 341 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 KCNA2P16389 499 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 CDH2P19022 906 aaPredicted RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 PEX2P28328 305 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 PCSK6P29122 969 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 PRDX6P30041 224 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 HOXC9P31274 260 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 GUCY1A2P33402 732 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 S100A5P33763 92 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 NOS2P35228 1153 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 ADD2P35612 726 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 FDFT1P37268 417 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 CETN2P41208 172 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 EPS15P42566 896 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 SLCO1A2P46721 670 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 RXRGP48443 463 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 GSSP48637 474 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 EIF2B2P49770 351 aaKnown RBP2.85□□□□□ -1.95
MDC1-208ENST00000494654 PLTPP55058 493 aa2.85□□□□□ -1.95
MDC1-208ENST00000494654 NCKAP1LP55160 1127 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms