RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 ATP13A4Q4VNC1 1196 aa10.6□□□□□ -0.71
LINC00488-201ENST00000494582 CCDC92Q53HC0 331 aaPredicted RBP10.6□□□□□ -0.71
LINC00488-201ENST00000494582 TCHHL1Q5QJ38 904 aaPredicted RBP10.6□□□□□ -0.71
LINC00488-201ENST00000494582 OGFRL1Q5TC84 451 aaPredicted RBP10.6□□□□□ -0.71
LINC00488-201ENST00000494582 MAP3K21Q5TCX8 1036 aa10.6□□□□□ -0.71
LINC00488-201ENST00000494582 MYCT1Q8N699 235 aa10.6□□□□□ -0.71
LINC00488-201ENST00000494582 ICA1LQ8NDH6 482 aa10.6□□□□□ -0.71
LINC00488-201ENST00000494582 NEDD1Q8NHV4 660 aa10.6□□□□□ -0.71
LINC00488-201ENST00000494582 GIPC3Q8TF64 312 aa10.6□□□□□ -0.71
LINC00488-201ENST00000494582 RPGRQ92834 1020 aaKnown RBP10.6□□□□□ -0.71
LINC00488-201ENST00000494582 BTBD9Q96Q07 612 aa10.6□□□□□ -0.71
LINC00488-201ENST00000494582 PPP1R10Q96QC0 940 aaKnown RBP10.6□□□□□ -0.71
LINC00488-201ENST00000494582 KCNK4Q9NYG8 393 aa10.6□□□□□ -0.71
LINC00488-201ENST00000494582 POLIQ9UNA4 740 aa10.6□□□□□ -0.71
LINC00488-201ENST00000494582 DTNAQ9Y4J8 743 aa10.6□□□□□ -0.71
LINC00488-201ENST00000494582 SF3B1O75533 1304 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00488-201ENST00000494582 PI4K2BG5E9Z4 385 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 RPA1P27694 616 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 SERPINB6P35237 376 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 BST1Q10588 318 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 RABGAP1LQ5R372 815 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 FAM182AQ5T1J6 154 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 GRAMD4Q6IC98 578 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 RINT1Q6NUQ1 792 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 PGM2L1Q6PCE3 622 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 C3orf62Q6ZUJ4 267 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 DENND5BQ6ZUT9 1274 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 TRIM50Q86XT4 487 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 HPS6Q86YV9 775 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 ADGRF4Q8IZF3 695 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 TAB3Q8N5C8 712 aaPredicted RBP10.59□□□□□ -0.71
LINC00488-201ENST00000494582 DEPTORQ8TB45 409 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 GRIN3AQ8TCU5 1115 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 DQX1Q8TE96 717 aaKnown RBP10.59□□□□□ -0.71
LINC00488-201ENST00000494582 DHX38Q92620 1227 aaKnown RBP10.59□□□□□ -0.71
LINC00488-201ENST00000494582 MKL1Q969V6 931 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 MAML3Q96JK9 1138 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 ZNF512Q96ME7 567 aaPredicted RBP10.59□□□□□ -0.71
LINC00488-201ENST00000494582 ACAP3Q96P50 834 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 PLVAPQ9BX97 442 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 ANO3Q9BYT9 981 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 NYXQ9GZU5 481 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 PCIF1Q9H4Z3 704 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 C10orf88Q9H8K7 445 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 OLFML3Q9NRN5 406 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 SUN2Q9UH99 717 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 SOX13Q9UN79 622 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 CLEC11AQ9Y240 323 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 TMX2-CTNND1H3BSU7 103 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 CYB561D2O14569 222 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 LIASO43766 372 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 CYP11B1P15538 503 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 TCF4P15884 667 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 ALDH1A3P47895 512 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 CDKL1Q00532 357 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 CD300CQ08708 224 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 PDK1Q15118 436 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 LZTR1Q8N653 840 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 PIP4K2CQ8TBX8 421 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 C17orf50Q8WW18 174 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 DDX1Q92499 740 aaKnown RBP10.59□□□□□ -0.71
LINC00488-201ENST00000494582 FOXP3Q9BZS1 431 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 ARMC7Q9H6L4 198 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 ZNF696Q9H7X3 374 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 CYP4F11Q9HBI6 524 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 PACSIN3Q9UKS6 424 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 POMPQ9Y244 141 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 FRMD4BQ9Y2L6 1034 aa10.59□□□□□ -0.71
LINC00488-201ENST00000494582 FBP2O00757 339 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 POLR2MP0CAP2 368 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 GSTT2P0CG29 244 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 GSTT2BP0CG30 244 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 THRAP10827 490 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 FAAP100Q0VG06 881 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 KRT81Q14533 505 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 C16orf72Q14CZ0 275 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 NFIL3Q16649 462 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 PRR16Q569H4 304 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 C6orf52Q5T4I8 152 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 KAZNQ674X7 775 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 POTEHQ6S545 545 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 DZIP1Q86YF9 867 aaKnown RBP10.58□□□□□ -0.72
LINC00488-201ENST00000494582 ALDH16A1Q8IZ83 802 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 SEMA4DQ92854 862 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 CELF1Q92879 486 aaKnown RBP10.58□□□□□ -0.72
LINC00488-201ENST00000494582 ZFRQ96KR1 1074 aaKnown RBP10.58□□□□□ -0.72
LINC00488-201ENST00000494582 C1orf21Q9H246 121 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 PSTPIP2Q9H939 334 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 XPNPEP1Q9NQW7 623 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 TMOD2Q9NZR1 351 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 FAF1Q9UNN5 650 aaPredicted RBP10.58□□□□□ -0.72
LINC00488-201ENST00000494582 AP4B1Q9Y6B7 739 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 AK5Q9Y6K8 562 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 USP17L10C9JJH3 530 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 EIF3DO15371 548 aaKnown RBP eCLIP10.58□□□□□ -0.72
LINC00488-201ENST00000494582 ITM2AO43736 263 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 PEX1O43933 1283 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 IL1BP01584 269 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 SRGAP2CP0DJJ0 459 aa10.58□□□□□ -0.72
LINC00488-201ENST00000494582 SRGAP2BP0DMP2 458 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms