RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 NELL2Q99435 816 aa35.41■■■■□ 3.26
CBX4-203ENST00000494546 OSBPL6Q9BZF3 934 aa35.41■■■■□ 3.26
CBX4-203ENST00000494546 SDCBP2Q9H190 292 aa35.41■■■■□ 3.26
CBX4-203ENST00000494546 MMRN2Q9H8L6 949 aa35.41■■■■□ 3.26
CBX4-203ENST00000494546 MRPS17Q9Y2R5 130 aaKnown RBP35.41■■■■□ 3.26
CBX4-203ENST00000494546 PIAS3Q9Y6X2 628 aa35.41■■■■□ 3.26
CBX4-203ENST00000494546 ARNTLO00327 626 aa35.4■■■■□ 3.26
CBX4-203ENST00000494546 HLA-DRAP01903 254 aa35.4■■■■□ 3.26
CBX4-203ENST00000494546 P4HA1P13674 534 aa35.4■■■■□ 3.26
CBX4-203ENST00000494546 TARSP26639 723 aaKnown RBP35.4■■■■□ 3.26
CBX4-203ENST00000494546 GCLMP48507 274 aa35.4■■■■□ 3.26
CBX4-203ENST00000494546 CELF5Q8N6W0 485 aaKnown RBP35.4■■■■□ 3.26
CBX4-203ENST00000494546 BPIFB1Q8TDL5 484 aa35.4■■■■□ 3.26
CBX4-203ENST00000494546 EEF2KMTQ96G04 330 aa35.4■■■■□ 3.26
CBX4-203ENST00000494546 ZFYVE19Q96K21 471 aa35.4■■■■□ 3.26
CBX4-203ENST00000494546 SPATA17Q96L03 361 aa35.4■■■■□ 3.26
CBX4-203ENST00000494546 BCO2Q9BYV7 579 aa35.4■■■■□ 3.26
CBX4-203ENST00000494546 UTP3Q9NQZ2 479 aaKnown RBP eCLIP35.4■■■■□ 3.266e-9■■■■■ 98.1
CBX4-203ENST00000494546 NUP210Q8TEM1 1887 aaPredicted RBP35.39■■■■□ 3.26
CBX4-203ENST00000494546 TRIM66O15016 1216 aa35.39■■■■□ 3.26
CBX4-203ENST00000494546 TADA3O75528 432 aa35.39■■■■□ 3.26
CBX4-203ENST00000494546 SPOPLQ6IQ16 392 aa35.39■■■■□ 3.26
CBX4-203ENST00000494546 MON1AQ86VX9 555 aa35.39■■■■□ 3.26
CBX4-203ENST00000494546 TAF4BQ92750 862 aa35.39■■■■□ 3.26
CBX4-203ENST00000494546 TRPC7Q9HCX4 862 aa35.39■■■■□ 3.26
CBX4-203ENST00000494546 CIZ1Q9ULV3 898 aaPredicted RBP35.39■■■■□ 3.26
CBX4-203ENST00000494546 NDRG2Q9UN36 371 aaKnown RBP35.39■■■■□ 3.26
CBX4-203ENST00000494546 SHISA7A6NL88 538 aa35.38■■■■□ 3.25
CBX4-203ENST00000494546 MAN2B1O00754 1011 aa35.38■■■■□ 3.25
CBX4-203ENST00000494546 PPP3CAQ08209 521 aa35.38■■■■□ 3.25
CBX4-203ENST00000494546 ARHGAP29Q52LW3 1261 aa35.38■■■■□ 3.25
CBX4-203ENST00000494546 B3GNT5Q9BYG0 378 aa35.38■■■■□ 3.25
CBX4-203ENST00000494546 ZNF518BQ9C0D4 1074 aa35.38■■■■□ 3.25
CBX4-203ENST00000494546 TICRRQ7Z2Z1 1910 aa35.38■■■■□ 3.25
CBX4-203ENST00000494546 F8VP50 259 aa35.37■■■■□ 3.25
CBX4-203ENST00000494546 CLDN5O00501 218 aa35.37■■■■□ 3.25
CBX4-203ENST00000494546 ASS1P00966 412 aaKnown RBP35.37■■■■□ 3.25
CBX4-203ENST00000494546 DENND5BQ6ZUT9 1274 aa35.37■■■■□ 3.25
CBX4-203ENST00000494546 SPATA20Q8TB22 786 aa35.37■■■■□ 3.25
CBX4-203ENST00000494546 USP13Q92995 863 aaPredicted RBP35.37■■■■□ 3.25
CBX4-203ENST00000494546 TSG101Q99816 390 aa35.37■■■■□ 3.25
CBX4-203ENST00000494546 IMPG2Q9BZV3 1241 aa35.37■■■■□ 3.25
CBX4-203ENST00000494546 ELOVL4Q9GZR5 314 aa35.37■■■■□ 3.25
CBX4-203ENST00000494546 CCL26Q9Y258 94 aa35.37■■■■□ 3.25
CBX4-203ENST00000494546 CACNA1HO95180 2353 aa35.36■■■■□ 3.25
CBX4-203ENST00000494546 CETN3O15182 167 aa35.36■■■■□ 3.25
CBX4-203ENST00000494546 NCAM2O15394 837 aa35.36■■■■□ 3.25
CBX4-203ENST00000494546 KINO60870 393 aaKnown RBP35.36■■■■□ 3.25
CBX4-203ENST00000494546 KPNA1P52294 538 aaPredicted RBP35.36■■■■□ 3.25
CBX4-203ENST00000494546 C1orf210Q8IVY1 113 aa35.36■■■■□ 3.25
CBX4-203ENST00000494546 TTC8Q8TAM2 541 aa35.36■■■■□ 3.25
CBX4-203ENST00000494546 TAS1R2Q8TE23 839 aa35.36■■■■□ 3.25
CBX4-203ENST00000494546 FAM3CQ92520 227 aa35.36■■■■□ 3.25
CBX4-203ENST00000494546 TNIP3Q96KP6 325 aa35.36■■■■□ 3.25
CBX4-203ENST00000494546 C8orf48Q96LL4 319 aa35.36■■■■□ 3.25
CBX4-203ENST00000494546 CEP295NLQ96MC4 621 aa35.36■■■■□ 3.25
CBX4-203ENST00000494546 THG1LQ9NWX6 298 aaKnown RBP35.36■■■■□ 3.25
CBX4-203ENST00000494546 MIA3Q5JRA6 1907 aa35.36■■■■□ 3.25
CBX4-203ENST00000494546 COL4A2P08572 1712 aa35.35■■■■□ 3.25
CBX4-203ENST00000494546 SOBPA7XYQ1 873 aa35.35■■■■□ 3.25
CBX4-203ENST00000494546 EPB41P11171 864 aaKnown RBP35.35■■■■□ 3.25
CBX4-203ENST00000494546 CACNA2D1P54289 1103 aa35.35■■■■□ 3.25
CBX4-203ENST00000494546 USP46P62068 366 aa35.35■■■■□ 3.25
CBX4-203ENST00000494546 ENPEPQ07075 957 aa35.35■■■■□ 3.25
CBX4-203ENST00000494546 COBLL1Q53SF7 1204 aa35.35■■■■□ 3.25
CBX4-203ENST00000494546 MED10Q9BTT4 135 aa35.35■■■■□ 3.25
CBX4-203ENST00000494546 TDP1Q9NUW8 608 aa35.35■■■■□ 3.25
CBX4-203ENST00000494546 SPATA6Q9NWH7 488 aaPredicted RBP35.35■■■■□ 3.25
CBX4-203ENST00000494546 GADD45BO75293 160 aaPredicted RBP35.34■■■■□ 3.25
CBX4-203ENST00000494546 CCNE1P24864 410 aa35.34■■■■□ 3.25
CBX4-203ENST00000494546 ISM2Q6H9L7 571 aa35.34■■■■□ 3.25
CBX4-203ENST00000494546 ACOT1Q86TX2 421 aa35.34■■■■□ 3.25
CBX4-203ENST00000494546 KIF9Q9HAQ2 790 aa35.34■■■■□ 3.25
CBX4-203ENST00000494546 GTSE1Q9NYZ3 720 aa35.34■■■■□ 3.25
CBX4-203ENST00000494546 ASPAP45381 313 aa35.33■■■■□ 3.25
CBX4-203ENST00000494546 SOX9P48436 509 aa35.33■■■■□ 3.25
CBX4-203ENST00000494546 PLCB2Q00722 1185 aa35.33■■■■□ 3.25
CBX4-203ENST00000494546 ORC1Q13415 861 aa35.33■■■■□ 3.25
CBX4-203ENST00000494546 CLDN23Q96B33 292 aa35.33■■■■□ 3.25
CBX4-203ENST00000494546 GTPBP4Q9BZE4 634 aaKnown RBP35.33■■■■□ 3.25
CBX4-203ENST00000494546 TMEM8AQ9HCN3 771 aa35.33■■■■□ 3.25
CBX4-203ENST00000494546 TMEM30AQ9NV96 361 aa35.33■■■■□ 3.25
CBX4-203ENST00000494546 EHD2Q9NZN4 543 aa35.33■■■■□ 3.25
CBX4-203ENST00000494546 DENND4CQ5VZ89 1909 aa35.33■■■■□ 3.25
CBX4-203ENST00000494546 OBSL1O75147 1896 aa35.33■■■■□ 3.25
CBX4-203ENST00000494546 ATP8B3O60423 1300 aa35.32■■■■□ 3.25
CBX4-203ENST00000494546 PTPRDP23468 1912 aa35.32■■■■□ 3.25
CBX4-203ENST00000494546 TRAV19A0A0A6YYK7 116 aa35.32■■■■□ 3.24
CBX4-203ENST00000494546 NBL1P41271 181 aa35.32■■■■□ 3.24
CBX4-203ENST00000494546 MAGEA9P43362 315 aa35.32■■■■□ 3.24
CBX4-203ENST00000494546 NDST1P52848 882 aa35.32■■■■□ 3.24
CBX4-203ENST00000494546 NOP14P78316 857 aaKnown RBP35.32■■■■□ 3.24
CBX4-203ENST00000494546 TNK2Q07912 1038 aa35.32■■■■□ 3.24
CBX4-203ENST00000494546 FRMD5Q7Z6J6 570 aa35.32■■■■□ 3.24
CBX4-203ENST00000494546 ADSSL1Q8N142 457 aa35.32■■■■□ 3.24
CBX4-203ENST00000494546 SLC22A12Q96S37 553 aa35.32■■■■□ 3.24
CBX4-203ENST00000494546 CYP2S1Q96SQ9 504 aa35.32■■■■□ 3.24
CBX4-203ENST00000494546 C8orf33Q9H7E9 229 aaPredicted RBP35.32■■■■□ 3.24
CBX4-203ENST00000494546 HMGXB4Q9UGU5 601 aa35.32■■■■□ 3.24
CBX4-203ENST00000494546 C2orf78A6NCI8 922 aa35.31■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms