RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 FAM102AQ5T9C2 384 aaPredicted RBP17.41■□□□□ 0.38
ATG4B-225ENST00000494465 MFSD7Q6UXD7 560 aa17.41■□□□□ 0.38
ATG4B-225ENST00000494465 POLNQ7Z5Q5 900 aa17.41■□□□□ 0.38
ATG4B-225ENST00000494465 PXYLP1Q8TE99 480 aa17.41■□□□□ 0.38
ATG4B-225ENST00000494465 IPO4Q8TEX9 1081 aaKnown RBP17.41■□□□□ 0.38
ATG4B-225ENST00000494465 RBM41Q96IZ5 413 aaKnown RBP17.41■□□□□ 0.38
ATG4B-225ENST00000494465 GRHL1Q9NZI5 618 aa17.41■□□□□ 0.38
ATG4B-225ENST00000494465 RASAL2Q9UJF2 1139 aa17.41■□□□□ 0.38
ATG4B-225ENST00000494465 SNX24Q9Y343 169 aa17.41■□□□□ 0.38
ATG4B-225ENST00000494465 KRT1P04264 644 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 SETSIPP0DME0 302 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 RPL21P46778 160 aaKnown RBP17.4■□□□□ 0.38
ATG4B-225ENST00000494465 PDE4CQ08493 712 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 SNX1Q13596 522 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 FAM26DQ5JW98 314 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 ZDHHC24Q6UX98 284 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 TMEM110Q86TL2 294 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 OSTM1Q86WC4 334 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 ADGRF2Q8IZF7 708 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 FAM71BQ8TC56 605 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 RAET1EQ8TD07 263 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 ACSF2Q96CM8 615 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-225ENST00000494465 TRAIPQ9BWF2 469 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 TSPYL2Q9H2G4 693 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-225ENST00000494465 PTPN22Q9Y2R2 807 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 ARL5CA6NH57 179 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 C3orf70A6NLC5 250 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-225ENST00000494465 CABYRO75952 493 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 CCDC130P13994 396 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 WARSP23381 471 aaKnown RBP17.4■□□□□ 0.38
ATG4B-225ENST00000494465 PTPN7P35236 360 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 ALS2CLQ60I27 953 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 OLFML1Q6UWY5 402 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 TOP6BLQ8N6T0 577 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 GIT1Q9Y2X7 761 aa17.4■□□□□ 0.38
ATG4B-225ENST00000494465 C2CD4BA6NLJ0 364 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 HUS1O60921 280 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 ZNF623O75123 536 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 KRT10P13645 584 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 APLP1P51693 650 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 LHX8Q68G74 356 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 OR6B2Q6IFH4 312 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 SPOCD1Q6ZMY3 1216 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 HACE1Q8IYU2 909 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 STK32AQ8WU08 396 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 KHSRPQ92945 711 aaKnown RBP eCLIP17.39■□□□□ 0.383e-7■■□□□ 12.3
ATG4B-225ENST00000494465 ZIM3Q96PE6 472 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 SH3GL2Q99962 352 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 SNX25Q9H3E2 840 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 SLC38A7Q9NVC3 462 aa17.39■□□□□ 0.38
ATG4B-225ENST00000494465 DDX56Q9NY93 547 aaKnown RBP17.39■□□□□ 0.38
ATG4B-225ENST00000494465 ECEL1O95672 775 aa17.39■□□□□ 0.37
ATG4B-225ENST00000494465 THP07101 528 aa17.39■□□□□ 0.37
ATG4B-225ENST00000494465 CDKN2BP42772 138 aa17.39■□□□□ 0.37
ATG4B-225ENST00000494465 ZNF143P52747 638 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-225ENST00000494465 COPS2P61201 443 aa17.39■□□□□ 0.37
ATG4B-225ENST00000494465 ACAP1Q15027 740 aa17.39■□□□□ 0.37
ATG4B-225ENST00000494465 UAP1Q16222 522 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-225ENST00000494465 ANKRD52Q8NB46 1076 aa17.39■□□□□ 0.37
ATG4B-225ENST00000494465 MIS12Q9H081 205 aa17.39■□□□□ 0.37
ATG4B-225ENST00000494465 HESX1Q9UBX0 185 aa17.39■□□□□ 0.37
ATG4B-225ENST00000494465 FAN1Q9Y2M0 1017 aa17.39■□□□□ 0.37
ATG4B-225ENST00000494465 TDRD15B5MCY1 1934 aaKnown RBP17.38■□□□□ 0.37
ATG4B-225ENST00000494465 RPL34P49207 117 aaKnown RBP17.38■□□□□ 0.37
ATG4B-225ENST00000494465 FAM193AP78312 1265 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 GABPB1Q06547 395 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-225ENST00000494465 CCNG2Q16589 344 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 HSP90B2PQ58FF3 399 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 TMC3Q7Z5M5 1100 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 TXLNGYQ9BZA5 131 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 hCG_1818297A0A087WSY0 165 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 CYB561D2O14569 222 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 GABRDO14764 452 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 PAPSS1O43252 624 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-225ENST00000494465 MIPP30301 263 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 MAP2K2P36507 400 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 SCNN1GP51170 649 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 TAF5Q15542 800 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 SMTNL2Q2TAL5 461 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 SH3PXD2AQ5TCZ1 1133 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 C3orf58Q8NDZ4 430 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 FBXO25Q8TCJ0 367 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 RXFP2Q8WXD0 754 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 FMO2Q99518 471 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 FAM118BQ9BPY3 351 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 ZWILCHQ9H900 591 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 HOMER3Q9NSC5 361 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 NEU2Q9Y3R4 380 aa17.38■□□□□ 0.37
ATG4B-225ENST00000494465 A0A0U1RQF3 1178 aa17.37■□□□□ 0.37
ATG4B-225ENST00000494465 LRRD1A4D1F6 860 aa17.37■□□□□ 0.37
ATG4B-225ENST00000494465 TP73O15350 636 aa17.37■□□□□ 0.37
ATG4B-225ENST00000494465 HSF2BPO75031 334 aa17.37■□□□□ 0.37
ATG4B-225ENST00000494465 GNRH1P01148 92 aa17.37■□□□□ 0.37
ATG4B-225ENST00000494465 INHAP05111 366 aa17.37■□□□□ 0.37
ATG4B-225ENST00000494465 GPD1P21695 349 aa17.37■□□□□ 0.37
ATG4B-225ENST00000494465 ADORA2BP29275 332 aa17.37■□□□□ 0.37
ATG4B-225ENST00000494465 TKTP29401 623 aaKnown RBP17.37■□□□□ 0.37
ATG4B-225ENST00000494465 HSD17B3P37058 310 aa17.37■□□□□ 0.37
ATG4B-225ENST00000494465 CLCNKBP51801 687 aa17.37■□□□□ 0.37
ATG4B-225ENST00000494465 BCAT1P54687 386 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms