RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 TRIM68Q6AZZ1 485 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 CMTM8Q8IZV2 173 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 ADSSL1Q8N142 457 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 FSIP1Q8NA03 581 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 OR6B3Q8NGW1 331 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 SPATA18Q8TC71 538 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 TMC2Q8TDI7 906 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 BPIFB1Q8TDL5 484 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 CSGALNACT1Q8TDX6 532 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 PARD3BQ8TEW8 1205 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 USP13Q92995 863 aaPredicted RBP9.13□□□□□ -0.95
LRCH3-219ENST00000494069 E2F7Q96AV8 911 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 PCED1BQ96HM7 432 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 GCNAQ96QF7 691 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 SLC22A12Q96S37 553 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 CYP2S1Q96SQ9 504 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 NELL2Q99435 816 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 SMYD3Q9H7B4 428 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 ABCB6Q9NP58 842 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 GKN1Q9NS71 199 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 TMEM30AQ9NV96 361 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 MAGEC2Q9UBF1 373 aaPredicted RBP9.13□□□□□ -0.95
LRCH3-219ENST00000494069 CDH9Q9ULB4 789 aa9.13□□□□□ -0.95
LRCH3-219ENST00000494069 MRPS17Q9Y2R5 130 aaKnown RBP9.13□□□□□ -0.95
LRCH3-219ENST00000494069 RIF1Q5UIP0 2472 aaKnown RBP9.13□□□□□ -0.95
LRCH3-219ENST00000494069 C2orf78A6NCI8 922 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 SPECC1L-ADORA2AF8WAN1 911 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 CLDN5O00501 218 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 PHACTR2O75167 634 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 ARSAP15289 507 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 WEE1P30291 646 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 USP46P62068 366 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 RPL10AP62906 217 aaKnown RBP9.12□□□□□ -0.95
LRCH3-219ENST00000494069 TNNC1P63316 161 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 PSMD2Q13200 908 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 TRPC3Q13507 836 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 ARHGAP29Q52LW3 1261 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 ARSIQ5FYB1 569 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 C1orf220Q5T0J3 134 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 CEP135Q66GS9 1140 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 NAIF1Q69YI7 327 aaPredicted RBP9.12□□□□□ -0.95
LRCH3-219ENST00000494069 SCARA5Q6ZMJ2 495 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 KRBA2Q6ZNG9 492 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 Q6ZS52 159 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 MON1AQ86VX9 555 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 SLC9A9Q8IVB4 645 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 CELF5Q8N6W0 485 aaKnown RBP9.12□□□□□ -0.95
LRCH3-219ENST00000494069 TTC16Q8NEE8 873 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 MRPS31Q92665 395 aaKnown RBP9.12□□□□□ -0.95
LRCH3-219ENST00000494069 CHFRQ96EP1 664 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 MYRFLQ96LU7 910 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 B3GNT5Q9BYG0 378 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 ZNF518BQ9C0D4 1074 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 SDCBP2Q9H190 292 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 CHRDQ9H2X0 955 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 SNX25Q9H3E2 840 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 TRPC7Q9HCX4 862 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 HPS4Q9NQG7 708 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.12□□□□□ -0.959e-25■■■■■ 288.4
LRCH3-219ENST00000494069 C2orf42Q9NWW7 574 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 OBP2AQ9NY56 170 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 CGNQ9P2M7 1197 aaKnown RBP9.12□□□□□ -0.95
LRCH3-219ENST00000494069 USP25Q9UHP3 1055 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 WDR87Q6ZQQ6 2873 aa9.12□□□□□ -0.95
LRCH3-219ENST00000494069 FAM186AA6NE01 2351 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 A0A1W2PQ27 194 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 A0A1W2PQ64 194 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 A0A1W2PQD8 194 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 A8MXQ7 604 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 F8VP50 259 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 PDXKO00764 312 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 NCAM2O15394 837 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 TACC1O75410 805 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 RHOBTB3O94955 611 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 ZNF202O95125 648 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 STAU1O95793 577 aaKnown RBP9.11□□□□□ -0.95
LRCH3-219ENST00000494069 TDGF1P13385 188 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 PTPN1P18031 435 aaKnown RBP9.11□□□□□ -0.95
LRCH3-219ENST00000494069 CTHP32929 405 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 AVPR1AP37288 418 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 GRIK1P39086 918 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 MAGEA11P43364 429 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 RPS9P46781 194 aaKnown RBP9.11□□□□□ -0.95
LRCH3-219ENST00000494069 CLDN10P78369 228 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 ZXDBP98169 803 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 SATB1Q01826 763 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 DMWDQ09019 674 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 ORC1Q13415 861 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 BIRC3Q13489 604 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 NCOA4Q13772 614 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 PON2Q15165 354 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 SPOPLQ6IQ16 392 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 C4orf50Q6ZRC1 276 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 SV2AQ7L0J3 742 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 SMYD4Q8IYR2 804 aaPredicted RBP9.11□□□□□ -0.95
LRCH3-219ENST00000494069 DCLK2Q8N568 766 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 ARL14EPQ8N8R7 260 aaPredicted RBP9.11□□□□□ -0.95
LRCH3-219ENST00000494069 GOLGA5Q8TBA6 731 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 MYCBPAPQ8TBZ2 947 aa9.11□□□□□ -0.95
LRCH3-219ENST00000494069 ERCC4Q92889 916 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms