RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 DGKEP52429 567 aa5.32□□□□□ -1.56
ITGB1-216ENST00000493758 E2F2Q14209 437 aa5.32□□□□□ -1.56
ITGB1-216ENST00000493758 CNGA2Q16280 664 aa5.32□□□□□ -1.56
ITGB1-216ENST00000493758 MAVSQ7Z434 540 aa5.32□□□□□ -1.56
ITGB1-216ENST00000493758 C14orf80Q86SX3 495 aa5.32□□□□□ -1.56
ITGB1-216ENST00000493758 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.32□□□□□ -1.56
ITGB1-216ENST00000493758 SLC15A4Q8N697 577 aa5.32□□□□□ -1.56
ITGB1-216ENST00000493758 SOCS4Q8WXH5 440 aa5.32□□□□□ -1.56
ITGB1-216ENST00000493758 DHX36Q9H2U1 1008 aaKnown RBP5.32□□□□□ -1.56
ITGB1-216ENST00000493758 CXorf36Q9H7Y0 433 aa5.32□□□□□ -1.56
ITGB1-216ENST00000493758 GABRQQ9UN88 632 aa5.32□□□□□ -1.56
ITGB1-216ENST00000493758 USP19O94966 1318 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 PPM1DO15297 605 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 TBC1D4O60343 1298 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 MGEA5O60502 916 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 TTLL1O95922 423 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 IL6RP08887 468 aaPredicted RBP5.31□□□□□ -1.56
ITGB1-216ENST00000493758 KCNA3P22001 575 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 TBCCQ15814 346 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 ZIK1Q3SY52 487 aaPredicted RBP5.31□□□□□ -1.56
ITGB1-216ENST00000493758 ARHGAP40Q5TG30 622 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 RGS7BPQ6MZT1 257 aaPredicted RBP5.31□□□□□ -1.56
ITGB1-216ENST00000493758 ANKRD16Q6P6B7 361 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 CCDC149Q6ZUS6 474 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 RD3Q7Z3Z2 195 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 WDR53Q7Z5U6 358 aaPredicted RBP5.31□□□□□ -1.56
ITGB1-216ENST00000493758 BOLLQ8N9W6 283 aaKnown RBP5.31□□□□□ -1.56
ITGB1-216ENST00000493758 OR56A3Q8NH54 315 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 RSPRY1Q96DX4 576 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 CHPF2Q9P2E5 772 aa5.31□□□□□ -1.56
ITGB1-216ENST00000493758 KIF3BO15066 747 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 BRAFP15056 766 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 LLGL1Q15334 1064 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 KIAA0753Q2KHM9 967 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 PLA1AQ53H76 456 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 CERCAMQ5T4B2 595 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 DCAF12L1Q5VU92 463 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 FBXO42Q6P3S6 717 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 ZNF575Q86XF7 245 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 SLC15A3Q8IY34 581 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 RP9Q8TA86 221 aaKnown RBP5.3□□□□□ -1.56
ITGB1-216ENST00000493758 NTN5Q8WTR8 489 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-216ENST00000493758 TBC1D5Q92609 795 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 SPSB4Q96A44 273 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 MS4A7Q9GZW8 240 aaPredicted RBP5.3□□□□□ -1.56
ITGB1-216ENST00000493758 KLK15Q9H2R5 256 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 COL20A1Q9P218 1284 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 SERTAD3Q9UJW9 196 aa5.3□□□□□ -1.56
ITGB1-216ENST00000493758 PYCARD-AS1I3L0S3 204 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 C1RP00736 705 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 IGLV2-14P01704 120 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 JUPP14923 745 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 SUMO3P55854 103 aaPredicted RBP5.29□□□□□ -1.56
ITGB1-216ENST00000493758 FMO1Q01740 532 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 INSCQ1MX18 579 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 MTHFD1LQ6UB35 978 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 ZNF804AQ7Z570 1209 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 ZNF280BQ86YH2 543 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 WDR75Q8IWA0 830 aaKnown RBP5.29□□□□□ -1.56
ITGB1-216ENST00000493758 PPP1R9BQ96SB3 815 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 NUP62CLQ9H1M0 184 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 KIAA1586Q9HCI6 787 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 GEMIN8Q9NWZ8 242 aaKnown RBP5.29□□□□□ -1.56
ITGB1-216ENST00000493758 CPNE7Q9UBL6 633 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 DKK3Q9UBP4 350 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 CDY1Q9Y6F8 540 aa5.29□□□□□ -1.56
ITGB1-216ENST00000493758 LOC102723971A0A1B0GUV8 181 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 OVOL3O00110 214 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 PDHA1P08559 390 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 NR2F6P10588 404 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 IL1R1P14778 569 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 GPD1P21695 349 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 LIPAP38571 399 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 KRT17Q04695 432 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 AARS2Q5JTZ9 985 aaKnown RBP5.28□□□□□ -1.56
ITGB1-216ENST00000493758 BPIFB1Q8TDL5 484 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 STRBPQ96SI9 672 aaKnown RBP5.28□□□□□ -1.56
ITGB1-216ENST00000493758 TRIM5Q9C035 493 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 UNKQ9C0B0 810 aaKnown RBP5.28□□□□□ -1.56
ITGB1-216ENST00000493758 FAM83DQ9H4H8 585 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 ZNF287Q9HBT7 754 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 GLOD4Q9HC38 313 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 ARHGEF3Q9NR81 526 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 TRMT13Q9NUP7 481 aaKnown RBP5.28□□□□□ -1.56
ITGB1-216ENST00000493758 ZSCAN32Q9NX65 697 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 DNMT3BQ9UBC3 853 aaKnown RBP5.28□□□□□ -1.56
ITGB1-216ENST00000493758 OGDHLQ9ULD0 1010 aa5.28□□□□□ -1.56
ITGB1-216ENST00000493758 TMEM233B4DJY2 109 aa5.27□□□□□ -1.57
ITGB1-216ENST00000493758 M0R3H8 397 aa5.27□□□□□ -1.57
ITGB1-216ENST00000493758 INMTO95050 263 aa5.27□□□□□ -1.57
ITGB1-216ENST00000493758 TXNP10599 105 aaKnown RBP5.27□□□□□ -1.57
ITGB1-216ENST00000493758 CCT8P50990 548 aa5.27□□□□□ -1.57
ITGB1-216ENST00000493758 BCAT1P54687 386 aa5.27□□□□□ -1.57
ITGB1-216ENST00000493758 PROK1P58294 105 aa5.27□□□□□ -1.57
ITGB1-216ENST00000493758 TIAL1Q01085 375 aaKnown RBP eCLIP5.27□□□□□ -1.57
ITGB1-216ENST00000493758 EIF2B5Q13144 721 aaKnown RBP5.27□□□□□ -1.57
ITGB1-216ENST00000493758 TREML2Q5T2D2 321 aa5.27□□□□□ -1.57
ITGB1-216ENST00000493758 SYCE2Q6PIF2 218 aa5.27□□□□□ -1.57
ITGB1-216ENST00000493758 PTF1AQ7RTS3 328 aa5.27□□□□□ -1.57
ITGB1-216ENST00000493758 SESTD1Q86VW0 696 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms