RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 PTPN21Q16825 1174 aa5.39□□□□□ -1.55
SMC4-223ENST00000493695 KRT73Q86Y46 540 aa5.39□□□□□ -1.55
SMC4-223ENST00000493695 ZDHHC17Q8IUH5 632 aa5.39□□□□□ -1.55
SMC4-223ENST00000493695 GALNT4Q8N4A0 578 aa5.39□□□□□ -1.55
SMC4-223ENST00000493695 PTDSS2Q9BVG9 487 aa5.39□□□□□ -1.55
SMC4-223ENST00000493695 LMBRD1Q9NUN5 540 aa5.39□□□□□ -1.55
SMC4-223ENST00000493695 HESX1Q9UBX0 185 aa5.39□□□□□ -1.55
SMC4-223ENST00000493695 PRKAB1Q9Y478 270 aa5.39□□□□□ -1.55
SMC4-223ENST00000493695 CCDC187A0A096LP49 1063 aa5.38□□□□□ -1.55
SMC4-223ENST00000493695 ADAMTS3O15072 1205 aa5.38□□□□□ -1.55
SMC4-223ENST00000493695 FGBP02675 491 aa5.38□□□□□ -1.55
SMC4-223ENST00000493695 CYP2A6P11509 494 aaPredicted RBP5.38□□□□□ -1.55
SMC4-223ENST00000493695 ALDH5A1P51649 535 aaPredicted RBP5.38□□□□□ -1.55
SMC4-223ENST00000493695 FAM50AQ14320 339 aaKnown RBP5.38□□□□□ -1.55
SMC4-223ENST00000493695 DEPDC1Q5TB30 811 aa5.38□□□□□ -1.55
SMC4-223ENST00000493695 KIRREL2Q6UWL6 708 aa5.38□□□□□ -1.55
SMC4-223ENST00000493695 Q6ZWC4 215 aa5.38□□□□□ -1.55
SMC4-223ENST00000493695 PPP1R3BQ86XI6 285 aa5.38□□□□□ -1.55
SMC4-223ENST00000493695 TERB1Q8NA31 727 aa5.38□□□□□ -1.55
SMC4-223ENST00000493695 RP9Q8TA86 221 aaKnown RBP5.38□□□□□ -1.55
SMC4-223ENST00000493695 TMEM79Q9BSE2 394 aa5.38□□□□□ -1.55
SMC4-223ENST00000493695 WWOXQ9NZC7 414 aa5.38□□□□□ -1.55
SMC4-223ENST00000493695 E5RJQ4 531 aa5.37□□□□□ -1.55
SMC4-223ENST00000493695 H3BUI4 141 aa5.37□□□□□ -1.55
SMC4-223ENST00000493695 ADAM10O14672 748 aa5.37□□□□□ -1.55
SMC4-223ENST00000493695 DCLK1O15075 740 aa5.37□□□□□ -1.55
SMC4-223ENST00000493695 GCATO75600 419 aa5.37□□□□□ -1.55
SMC4-223ENST00000493695 BCAR3O75815 825 aa5.37□□□□□ -1.55
SMC4-223ENST00000493695 DLDP09622 509 aaKnown RBP5.37□□□□□ -1.55
SMC4-223ENST00000493695 CIPCQ9C0C6 399 aa5.37□□□□□ -1.55
SMC4-223ENST00000493695 SSX2IPQ9Y2D8 614 aa5.37□□□□□ -1.55
SMC4-223ENST00000493695 ATP8A1Q9Y2Q0 1164 aa5.37□□□□□ -1.55
SMC4-223ENST00000493695 hCG_1984214I3L0E3 225 aa5.36□□□□□ -1.55
SMC4-223ENST00000493695 SLC16A6O15403 523 aa5.36□□□□□ -1.55
SMC4-223ENST00000493695 UNC5CO95185 931 aa5.36□□□□□ -1.55
SMC4-223ENST00000493695 ATP5F1P24539 256 aaPredicted RBP5.36□□□□□ -1.55
SMC4-223ENST00000493695 PPIFP30405 207 aaKnown RBP5.36□□□□□ -1.55
SMC4-223ENST00000493695 CCKARP32238 428 aa5.36□□□□□ -1.55
SMC4-223ENST00000493695 TCF15Q12870 199 aa5.36□□□□□ -1.55
SMC4-223ENST00000493695 MTMR1Q13613 665 aa5.36□□□□□ -1.55
SMC4-223ENST00000493695 KIAA1161Q6NSJ0 714 aa5.36□□□□□ -1.55
SMC4-223ENST00000493695 IRF2BP2Q7Z5L9 587 aa5.36□□□□□ -1.55
SMC4-223ENST00000493695 BRIX1Q8TDN6 353 aaKnown RBP5.36□□□□□ -1.55
SMC4-223ENST00000493695 EFHD1Q9BUP0 239 aa5.36□□□□□ -1.55
SMC4-223ENST00000493695 ADGRE3Q9BY15 652 aa5.36□□□□□ -1.55
SMC4-223ENST00000493695 FOXP1Q9H334 677 aaPredicted RBP5.36□□□□□ -1.55
SMC4-223ENST00000493695 MRPS17Q9Y2R5 130 aaKnown RBP5.36□□□□□ -1.55
SMC4-223ENST00000493695 H7C1Q1 480 aa5.35□□□□□ -1.55
SMC4-223ENST00000493695 AP4M1O00189 453 aa5.35□□□□□ -1.55
SMC4-223ENST00000493695 KATNA1O75449 491 aa5.35□□□□□ -1.55
SMC4-223ENST00000493695 GRPP07492 148 aa5.35□□□□□ -1.55
SMC4-223ENST00000493695 CHRM5P08912 532 aaPredicted RBP5.35□□□□□ -1.55
SMC4-223ENST00000493695 RENBPP51606 427 aa5.35□□□□□ -1.55
SMC4-223ENST00000493695 HK3P52790 923 aa5.35□□□□□ -1.55
SMC4-223ENST00000493695 GHRHRQ02643 423 aa5.35□□□□□ -1.55
SMC4-223ENST00000493695 ODF1Q14990 250 aa5.35□□□□□ -1.55
SMC4-223ENST00000493695 RBMS2Q15434 407 aaKnown RBP5.35□□□□□ -1.55
SMC4-223ENST00000493695 FAM177A1Q8N128 213 aaPredicted RBP5.35□□□□□ -1.55
SMC4-223ENST00000493695 MOGAT1Q96PD6 335 aa5.35□□□□□ -1.55
SMC4-223ENST00000493695 PNPOQ9NVS9 261 aa5.35□□□□□ -1.55
SMC4-223ENST00000493695 NDRG4Q9ULP0 352 aaKnown RBP5.35□□□□□ -1.55
SMC4-223ENST00000493695 SCAF8Q9UPN6 1271 aaKnown RBP5.35□□□□□ -1.55
SMC4-223ENST00000493695 SHOC2Q9UQ13 582 aa5.35□□□□□ -1.55
SMC4-223ENST00000493695 TMEM232C9JQI7 657 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 MYO1CO00159 1063 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 TMEM191BP0C7N4 346 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 TYRP14679 529 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 HDCP19113 662 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 PDCP20941 246 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 FPR3P25089 353 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 FXR1P51114 621 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMC4-223ENST00000493695 KRT17Q04695 432 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 MIDNQ504T8 468 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 SLC15A3Q8IY34 581 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 OSCP1Q8WVF1 389 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 SNX18Q96RF0 628 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 SMAD5Q99717 465 aaKnown RBP5.34□□□□□ -1.55
SMC4-223ENST00000493695 TMX1Q9H3N1 280 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 MTMR4Q9NYA4 1195 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 PI4KBQ9UBF8 816 aa5.34□□□□□ -1.55
SMC4-223ENST00000493695 SBNO2Q9Y2G9 1366 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 H3BNX3 289 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 FCHO1O14526 889 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 GABRDO14764 452 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 RNF8O76064 485 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 CYP19A1P11511 503 aaPredicted RBP5.33□□□□□ -1.56
SMC4-223ENST00000493695 ADORA2AP29274 412 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 SOX8P57073 446 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 ZNF91Q05481 1191 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 FAM187BQ17R55 369 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 KHDC1LQ5JSQ8 128 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 DPY19L3Q6ZPD9 716 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 CAND1Q86VP6 1230 aaKnown RBP5.33□□□□□ -1.56
SMC4-223ENST00000493695 ACRBPQ8NEB7 543 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 C16orf52Q8NHV5 167 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 PIGOQ8TEQ8 1089 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 CCDC17Q96LX7 622 aa5.33□□□□□ -1.56
SMC4-223ENST00000493695 LENG8Q96PV6 779 aaPredicted RBP5.33□□□□□ -1.56
SMC4-223ENST00000493695 SARS2Q9NP81 518 aaKnown RBP5.33□□□□□ -1.56
SMC4-223ENST00000493695 PCDHA6Q9UN73 950 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms