RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 GOLGA8JA6NMD2 632 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 CD2BP2O95400 341 aaKnown RBP13.23□□□□□ -0.29
SAMM50-205ENST00000493621 CAVIN2O95810 425 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 KRT19P08727 400 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 GBP1P32455 592 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 C8orf34Q49A92 452 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 L1TD1Q5T7N2 865 aaKnown RBP13.23□□□□□ -0.29
SAMM50-205ENST00000493621 ERICH6BQ5W0A0 696 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 ADGRF2Q8IZF7 708 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 LRRC52Q8N7C0 313 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 SH3RF2Q8TEC5 729 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 LINC00597Q9H2U6 94 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 GCNT4Q9P109 453 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 SEL1LQ9UBV2 794 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 EBF1Q9UH73 591 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 ITGA11Q9UKX5 1188 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 SNX9Q9Y5X1 595 aa13.23□□□□□ -0.29
SAMM50-205ENST00000493621 MYMKA6NI61 221 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 C4orf47A7E2U8 309 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 GCNT3O95395 438 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 LDHAP00338 332 aaKnown RBP13.22□□□□□ -0.29
SAMM50-205ENST00000493621 GAP43P17677 238 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 HDCP19113 662 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 LHX1P48742 406 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 SEC13P55735 322 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 NR1H3Q13133 447 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 KCNB1Q14721 858 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 CFAP221Q4G0U5 840 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 BRAPQ7Z569 592 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 SYCP3Q8IZU3 236 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 TOP6BLQ8N6T0 577 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 FSIP1Q8NA03 581 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 TSTD1Q8NFU3 115 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 CXorf38Q8TB03 319 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 TPSD1Q9BZJ3 242 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 GDAP2Q9NXN4 497 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 STK17AQ9UEE5 414 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 CCDC39Q9UFE4 941 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 MYOFQ9NZM1 2061 aa13.22□□□□□ -0.29
SAMM50-205ENST00000493621 ANTXRLA6NF34 631 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 GABRDO14764 452 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 GIPC1O14908 333 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 ATP2C2O75185 946 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 NFATC1O95644 943 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 TMEM191BP0C7N4 346 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 GARTP22102 1010 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 PCSK1P29120 753 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 NOVA1P51513 510 aaKnown RBP13.21□□□□□ -0.29
SAMM50-205ENST00000493621 CASP5P51878 434 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 RBP5P82980 135 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 SOWAHAQ2M3V2 549 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 USP39Q53GS9 565 aaKnown RBP13.21□□□□□ -0.29
SAMM50-205ENST00000493621 C2orf27AQ580R0 203 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 RRAGBQ5VZM2 374 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 SV2BQ7L1I2 683 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 SPATA18Q8TC71 538 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 USP33Q8TEY7 942 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 DNAJC19Q96DA6 116 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 FUBP3Q96I24 572 aaKnown RBP eCLIP13.21□□□□□ -0.29
SAMM50-205ENST00000493621 CBWD1Q9BRT8 395 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 MTMR12Q9C0I1 747 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 PCIF1Q9H4Z3 704 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 PDE11AQ9HCR9 933 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 MAGEC2Q9UBF1 373 aaPredicted RBP13.21□□□□□ -0.29
SAMM50-205ENST00000493621 SIX4Q9UIU6 781 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 ARHGAP26Q9UNA1 814 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 CLIC4Q9Y696 253 aa13.21□□□□□ -0.29
SAMM50-205ENST00000493621 LNP1A1A4G5 178 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 K7EQS6 105 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 IDEP14735 1019 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 TCF3P15923 654 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 BCKDHBP21953 392 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 OPRD1P41143 372 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 MAGEA11P43364 429 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 PSMC1P62191 440 aaKnown RBP13.2□□□□□ -0.3
SAMM50-205ENST00000493621 DAB2IPQ5VWQ8 1189 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 PMS2CLQ68D20 193 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 LMBRD2Q68DH5 695 aaPredicted RBP13.2□□□□□ -0.3
SAMM50-205ENST00000493621 ANO7Q6IWH7 933 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 FAM171BQ6P995 826 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 C4orf50Q6ZRC1 276 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 TTC30AQ86WT1 665 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 CCDC26Q8TAB7 109 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 MYLPFQ96A32 169 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 SYT15Q9BQS2 421 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 FGFBP2Q9BYJ0 223 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 RALYQ9UKM9 306 aaKnown RBP13.2□□□□□ -0.3
SAMM50-205ENST00000493621 R3HCC1Q9Y3T6 440 aaKnown RBP13.2□□□□□ -0.3
SAMM50-205ENST00000493621 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.2□□□□□ -0.3
SAMM50-205ENST00000493621 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
SAMM50-205ENST00000493621 TNRC6BQ9UPQ9 1833 aaKnown RBP13.2□□□□□ -0.3
SAMM50-205ENST00000493621 LEFTY2O00292 366 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 KHNYNO15037 678 aaKnown RBP13.19□□□□□ -0.3
SAMM50-205ENST00000493621 PROS1P07225 676 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 BDNFP23560 247 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 LMO2P25791 158 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 GRIK1P39086 918 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 PDE6CP51160 858 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 USP46P62068 366 aa13.19□□□□□ -0.3
SAMM50-205ENST00000493621 ZXDBP98169 803 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms