RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 CPA6Q8N4T0 437 aa17.78■□□□□ 0.44
PTPRU-208ENST00000493601 SNX21Q969T3 373 aa17.78■□□□□ 0.44
PTPRU-208ENST00000493601 MYLPFQ96A32 169 aa17.78■□□□□ 0.44
PTPRU-208ENST00000493601 SPATA17Q96L03 361 aa17.78■□□□□ 0.44
PTPRU-208ENST00000493601 MMS19Q96T76 1030 aa17.78■□□□□ 0.44
PTPRU-208ENST00000493601 CGRRF1Q99675 332 aa17.78■□□□□ 0.44
PTPRU-208ENST00000493601 C7orf25Q9BPX7 421 aa17.78■□□□□ 0.44
PTPRU-208ENST00000493601 MAGEC2Q9UBF1 373 aaPredicted RBP17.78■□□□□ 0.44
PTPRU-208ENST00000493601 OTOL1A6NHN0 477 aaPredicted RBP17.77■□□□□ 0.44
PTPRU-208ENST00000493601 POLR2DO15514 142 aaKnown RBP17.77■□□□□ 0.44
PTPRU-208ENST00000493601 TGFB1I1O43294 461 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 HRO43593 1189 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 ATG13O75143 517 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 ATP2C2O75185 946 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 TNNI1P19237 187 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 TGM1P22735 817 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 LMO2P25791 158 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 ANXA13P27216 316 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 CYP2J2P51589 502 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 CYP24A1Q07973 514 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 SPEM2Q0P670 501 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 USP4Q13107 963 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 KCNB1Q14721 858 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 PSMD6Q15008 389 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 ZNF77Q15935 545 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 FSTL4Q6MZW2 842 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 TRAPPC11Q7Z392 1133 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 WDR5BQ86VZ2 330 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 RIN3Q8TB24 985 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 ATP2A3Q93084 1043 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 PARD6AQ9NPB6 346 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 CRTAC1Q9NQ79 661 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 C2orf42Q9NWW7 574 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 EHD2Q9NZN4 543 aa17.77■□□□□ 0.44
PTPRU-208ENST00000493601 CGNQ9P2M7 1197 aaKnown RBP17.77■□□□□ 0.44
PTPRU-208ENST00000493601 MED19A0JLT2 244 aaPredicted RBP17.76■□□□□ 0.43
PTPRU-208ENST00000493601 TRIM66O15016 1216 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 HSP90AA1P07900 732 aaKnown RBP17.76■□□□□ 0.43
PTPRU-208ENST00000493601 ZSCAN22P10073 491 aaPredicted RBP17.76■□□□□ 0.43
PTPRU-208ENST00000493601 TNNC1P63316 161 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 CYP27A1Q02318 531 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 EHHADHQ08426 723 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 FOXD4L5Q5VV16 416 aaPredicted RBP17.76■□□□□ 0.43
PTPRU-208ENST00000493601 CEP68Q76N32 757 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 HSCBQ8IWL3 235 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 NELFCDQ8IXH7 590 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 XXYLT1Q8NBI6 393 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 RDH13Q8NBN7 331 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 TTC16Q8NEE8 873 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 OSCP1Q8WVF1 389 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 SCFD1Q8WVM8 642 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 FOXD4L4Q8WXT5 416 aaPredicted RBP17.76■□□□□ 0.43
PTPRU-208ENST00000493601 CCDC127Q96BQ5 260 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 CHFRQ96EP1 664 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 SLC22A12Q96S37 553 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 SNX25Q9H3E2 840 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 DUS2Q9NX74 493 aaKnown RBP17.76■□□□□ 0.43
PTPRU-208ENST00000493601 FAM13BQ9NYF5 915 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 KIAA1549LQ6ZVL6 1849 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 RALGAPA1Q6GYQ0 2036 aa17.76■□□□□ 0.43
PTPRU-208ENST00000493601 TACC1O75410 805 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 PDGFRBP09619 1106 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 PFKLP17858 780 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 DRD1P21728 446 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 BDNFP23560 247 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 GRIK1P39086 918 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 ME1P48163 572 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 IFNAR2P48551 515 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 SRSF5Q13243 272 aaKnown RBP17.75■□□□□ 0.43
PTPRU-208ENST00000493601 BMT2Q1RMZ1 405 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 ATL3Q6DD88 541 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 DENND5BQ6ZUT9 1274 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 MYCBPAPQ8TBZ2 947 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 PCED1BQ96HM7 432 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 CYP2S1Q96SQ9 504 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 P2RY13Q9BPV8 354 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 ECT2Q9H8V3 914 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 GCNT4Q9P109 453 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 SLC8A2Q9UPR5 921 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 MYO16Q9Y6X6 1858 aa17.75■□□□□ 0.43
PTPRU-208ENST00000493601 CCDC163A0A0D9SF12 145 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 PVALEFA0A1B0GWK0 134 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 C2orf78A6NCI8 922 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 CLIC2O15247 247 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 F13A1P00488 732 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 EGFP01133 1207 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 FAM163BP0C2L3 166 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 TCF3P15923 654 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 GJA4P35212 333 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 GNL1P36915 607 aaPredicted RBP17.74■□□□□ 0.43
PTPRU-208ENST00000493601 FOXD4L6Q3SYB3 417 aaPredicted RBP17.74■□□□□ 0.43
PTPRU-208ENST00000493601 FBXO43Q4G163 708 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 MDH1BQ5I0G3 518 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 RESP18Q5W5W9 173 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 PKN3Q6P5Z2 889 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 FOXD4L3Q6VB84 417 aaPredicted RBP17.74■□□□□ 0.43
PTPRU-208ENST00000493601 C12orf56Q8IXR9 622 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 ARL14EPQ8N8R7 260 aaPredicted RBP17.74■□□□□ 0.43
PTPRU-208ENST00000493601 SH3RF2Q8TEC5 729 aa17.74■□□□□ 0.43
PTPRU-208ENST00000493601 MRPL45Q9BRJ2 306 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms