RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 MYO18AQ92614 2054 aaKnown RBP15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 CHRM1P11229 460 aaPredicted RBP15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 PFKLP17858 780 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 PTGER3P43115 390 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 PDE6CP51160 858 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 CDR1P51861 262 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 SLC12A3P55017 1021 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 SEC13P55735 322 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 POU5F1Q01860 360 aaKnown RBP15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 NBR1Q14596 966 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 GAB4Q2WGN9 574 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 SV2CQ496J9 727 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 LYSMD4Q5XG99 296 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 TMEM92Q6UXU6 159 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 RABEPKQ7Z6M1 372 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 PDZD3Q86UT5 571 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 STKLD1Q8NE28 680 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 FBXO18Q8NFZ0 1043 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 SH3RF2Q8TEC5 729 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 FAM212AQ96EL1 285 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 PI4K2AQ9BTU6 479 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 TRPC7Q9HCX4 862 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 POLMQ9NP87 494 aaPredicted RBP15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 MBD1Q9UIS9 605 aaPredicted RBP15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 ODF2LQ9ULJ1 636 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 SLC6A14Q9UN76 642 aa15.33■□□□□ 0.04
PRPF40A-211ENST00000493468 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 KPNA7A9QM74 516 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 MAP3K13O43283 966 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 HNRNPLP14866 589 aaKnown RBP eCLIP15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 ABCD1P33897 745 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 EIF2DP41214 584 aaKnown RBP15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 ATXN3P54252 364 aaPredicted RBP15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 KCNB1Q14721 858 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 IL17AQ16552 155 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 DUOXA1Q1HG43 343 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 MAP7D1Q3KQU3 841 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 TMEFF1Q8IYR6 380 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 CHCHD4Q8N4Q1 142 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 CCDC33Q8N5R6 958 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 FSIP1Q8NA03 581 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 ZNF560Q96MR9 790 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 CYP2S1Q96SQ9 504 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 ACBD6Q9BR61 282 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 CAPN10Q9HC96 672 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 DPP3Q9NY33 737 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 PLXNB3Q9ULL4 1909 aa15.32■□□□□ 0.04
PRPF40A-211ENST00000493468 HELZ2Q9BYK8 2649 aaKnown RBP15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 APC2O95996 2303 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 OPHN1O60890 802 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 SERPINF2P08697 491 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 PNPLA4P41247 253 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 TOB1P50616 345 aaPredicted RBP15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 GNL2Q13823 731 aaKnown RBP15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 DDR2Q16832 855 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 CFAP221Q4G0U5 840 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 EOGTQ5NDL2 527 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 SDHAF4Q5VUM1 108 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 SLC39A4Q6P5W5 647 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 DTHD1Q6ZMT9 781 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 ARMCX6Q7L4S7 300 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 NT5DC4Q86YG4 428 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 ARL14EPQ8N8R7 260 aaPredicted RBP15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 IL17RCQ8NAC3 791 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 SPATA18Q8TC71 538 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 RLN3Q8WXF3 142 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 COL26A1Q96A83 441 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 PNMA5Q96PV4 448 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 PKMYT1Q99640 499 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 LINC00597Q9H2U6 94 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 PCDHB6Q9Y5E3 794 aa15.31■□□□□ 0.04
PRPF40A-211ENST00000493468 A0A0A0MRY4 1105 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 K7ENM7 598 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 AP5Z1O43299 807 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 FLNBO75369 2602 aaKnown RBP15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 CFIP05156 583 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 PLA2G4BP0C869 781 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 ITPKAP23677 461 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 CYP2F1P24903 491 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 ZNF131P52739 623 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 FAM193AP78312 1265 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 GFPT1Q06210 699 aaPredicted RBP15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 SCAPQ12770 1279 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 ZC2HC1CQ53FD0 456 aaPredicted RBP15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 ARSHQ5FYA8 562 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 INTS6LQ5JSJ4 861 aaKnown RBP15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 TTC30AQ86WT1 665 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 ALLCQ8N6M5 410 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 TXNDC5Q8NBS9 432 aaKnown RBP15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 ADAMTS14Q8WXS8 1223 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 FUBP3Q96I24 572 aaKnown RBP eCLIP15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 ATXN2Q99700 1313 aaKnown RBP15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 LLPHQ9BRT6 129 aaKnown RBP15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 ASH1LQ9NR48 2969 aaKnown RBP15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 DNAAF2Q9NVR5 837 aaKnown RBP15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 CELSR3Q9NYQ7 3312 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 MYOFQ9NZM1 2061 aa15.3■□□□□ 0.04
PRPF40A-211ENST00000493468 PTPRBP23467 1997 aa15.29■□□□□ 0.04
PRPF40A-211ENST00000493468 C2orf78A6NCI8 922 aa15.29■□□□□ 0.04
PRPF40A-211ENST00000493468 ANTXRLA6NF34 631 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms