RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 TWSG1Q9GZX9 223 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 VPS16Q9H269 839 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 KCND3Q9UK17 655 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 NOL7Q9UMY1 257 aaKnown RBP5.26□□□□□ -1.57
VPS13A-212ENST00000493341 LMTK3Q96Q04 1460 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 F5H0A9 414 aaPredicted RBP5.26□□□□□ -1.57
VPS13A-212ENST00000493341 ZSCAN9O15535 394 aaPredicted RBP5.26□□□□□ -1.57
VPS13A-212ENST00000493341 CCNT2O60583 730 aaKnown RBP5.26□□□□□ -1.57
VPS13A-212ENST00000493341 CHEK2O96017 543 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 PROCP04070 461 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 YY1P25490 414 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 HOXD12P35452 270 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 NPTX2P47972 431 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 CD97P48960 835 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 WNT3P56703 355 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 ALDH1L2Q3SY69 923 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 MGAT5BQ3V5L5 792 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 GAGE13Q4V321 117 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 CFAP58Q5T655 872 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 USP30Q70CQ3 517 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 BRINP3Q76B58 766 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 SYT13Q7L8C5 426 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 XYLT1Q86Y38 959 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 FLAD1Q8NFF5 587 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 SDCCAG3Q96C92 435 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 SLC46A1Q96NT5 459 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 MOGAT1Q96PD6 335 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 FAM83DQ9H4H8 585 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 HAUS2Q9NVX0 235 aa5.26□□□□□ -1.57
VPS13A-212ENST00000493341 PNMA6EA0A0J9YXQ4 647 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 SYNDIG1LA6NDD5 238 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 AHCYL1O43865 530 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 DOK2O60496 412 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 WNT11O96014 354 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 MYCLP12524 364 aaPredicted RBP5.25□□□□□ -1.57
VPS13A-212ENST00000493341 FDXRP22570 491 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 CDR1P51861 262 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 RBM5P52756 815 aaKnown RBP eCLIP5.25□□□□□ -1.57
VPS13A-212ENST00000493341 MANEALQ5VSG8 457 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 TMEM132EQ6IEE7 984 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 Q6ZUG5 572 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 B4GALNT4Q76KP1 1039 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 KRT77Q7Z794 578 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 GAS2L3Q86XJ1 694 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 RSC1A1Q92681 617 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 STAMQ92783 540 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 RNF125Q96EQ8 232 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 GPHA2Q96T91 129 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 TREX2Q9BQ50 279 aaPredicted RBP5.25□□□□□ -1.57
VPS13A-212ENST00000493341 REEP2Q9BRK0 252 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 LSM14BQ9BX40 385 aaKnown RBP5.25□□□□□ -1.57
VPS13A-212ENST00000493341 LMAN2LQ9H0V9 348 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 IL23AQ9NPF7 189 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 DNMT3BQ9UBC3 853 aaKnown RBP5.25□□□□□ -1.57
VPS13A-212ENST00000493341 CNPY2Q9Y2B0 182 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 DERAQ9Y315 318 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 CDY1Q9Y6F8 540 aa5.25□□□□□ -1.57
VPS13A-212ENST00000493341 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 A0A1W2PRQ8 180 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 PI4KAP2A4QPH2 592 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 STX16-NPEPL1H3BU86 382 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 STX16O14662 325 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 PJA2O43164 708 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 LMNAP02545 664 aaKnown RBP5.24□□□□□ -1.57
VPS13A-212ENST00000493341 ARP10275 920 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 CPA1P15085 419 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 CHRM3P20309 590 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 PTMSP20962 102 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 SLC6A2P23975 617 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 CCR9P51686 369 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 SATB1Q01826 763 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS13A-212ENST00000493341 PDCLQ13371 301 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 ANKRD1Q15327 319 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 SMAD1Q15797 465 aaKnown RBP5.24□□□□□ -1.57
VPS13A-212ENST00000493341 TBR1Q16650 682 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 ZNF750Q32MQ0 723 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 SLC30A10Q6XR72 485 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 ENOSF1Q7L5Y1 443 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 R3HCC1LQ7Z5L2 792 aaKnown RBP5.24□□□□□ -1.57
VPS13A-212ENST00000493341 PPP1R32Q7Z5V6 425 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 FITM2Q8N6M3 262 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 LSMEM1Q8N8F7 131 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 MZB1Q8WU39 189 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 CPT1BQ92523 772 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 MED15Q96RN5 788 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 AP1M1Q9BXS5 423 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 ABHD16BQ9H3Z7 469 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 RNPEPQ9H4A4 650 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 HESX1Q9UBX0 185 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 C19orf53Q9UNZ5 99 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-212ENST00000493341 ZDHHC9Q9Y397 364 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 B5MCH6 92 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 POLRMTO00411 1230 aaKnown RBP5.24□□□□□ -1.57
VPS13A-212ENST00000493341 PLOD3O60568 738 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 ZNF28P17035 718 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 IGFBP6P24592 240 aaPredicted RBP5.24□□□□□ -1.57
VPS13A-212ENST00000493341 ABCD3P28288 659 aa5.24□□□□□ -1.57
VPS13A-212ENST00000493341 SERPINA4P29622 427 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms