RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-219ENST00000492602 NCAPHQ15003 741 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 GAB4Q2WGN9 574 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 ZSCAN23Q3MJ62 389 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 MGAT5BQ3V5L5 792 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 XKR9Q5GH70 373 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 TMTC3Q6ZXV5 915 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 TRMT11Q7Z4G4 463 aaKnown RBP5.86□□□□□ -1.47
SEC13-219ENST00000492602 TMEM150AQ86TG1 271 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 MON1AQ86VX9 555 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 PTRH1Q86Y79 214 aaKnown RBP5.86□□□□□ -1.47
SEC13-219ENST00000492602 GATAD2AQ86YP4 633 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 NCOA7Q8NI08 942 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 EXOC6Q8TAG9 804 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 MRPS31Q92665 395 aaKnown RBP5.86□□□□□ -1.47
SEC13-219ENST00000492602 TOE1Q96GM8 510 aaKnown RBP5.86□□□□□ -1.47
SEC13-219ENST00000492602 VCPIP1Q96JH7 1222 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 CCDC136Q96JN2 1154 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 TMEM87BQ96K49 555 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 SUSD3Q96L08 255 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 ADPGKQ9BRR6 497 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 NFKBIZQ9BYH8 718 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 SLC6A17Q9H1V8 727 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 PDZD7Q9H5P4 517 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 TRPC7Q9HCX4 862 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 ARHGEF4Q9NR80 690 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 THSD1Q9NS62 852 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 PRMT7Q9NVM4 692 aaPredicted RBP5.86□□□□□ -1.47
SEC13-219ENST00000492602 EIF2B4Q9UI10 523 aaKnown RBP5.86□□□□□ -1.47
SEC13-219ENST00000492602 NFE2L3Q9Y4A8 694 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 PCDHB1Q9Y5F3 818 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 MYLKQ15746 1914 aa5.86□□□□□ -1.47
SEC13-219ENST00000492602 TLN1Q9Y490 2541 aaKnown RBP5.85□□□□□ -1.47
SEC13-219ENST00000492602 F8P00451 2351 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 PCNX1Q96RV3 2341 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 A0A1W2PQF6 199 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 A1L4Q6 167 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 TBC1D3BA6NDS4 549 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 ADAMTS3O15072 1205 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 DKC1O60832 514 aaKnown RBP eCLIP5.85□□□□□ -1.47
SEC13-219ENST00000492602 LARGE1O95461 756 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 MT-CO3P00414 261 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 F11P03951 625 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 ITGB2P05107 769 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 CKMP06732 381 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 ATF6P18850 670 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 GLRA2P23416 452 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 YWHABP31946 246 aaKnown RBP5.85□□□□□ -1.47
SEC13-219ENST00000492602 GRIA2P42262 883 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 TNFRSF4P43489 277 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 TUFMP49411 452 aaKnown RBP5.85□□□□□ -1.47
SEC13-219ENST00000492602 AFF3P51826 1226 aaKnown RBP5.85□□□□□ -1.47
SEC13-219ENST00000492602 ANTXR2P58335 489 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 NLRP12P59046 1061 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 INSM1Q01101 510 aaPredicted RBP5.85□□□□□ -1.47
SEC13-219ENST00000492602 RESTQ13127 1097 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 SKIDA1Q1XH10 827 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 ARL13BQ3SXY8 428 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 SGO2Q562F6 1265 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 B3GNT9Q6UX72 402 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 KIAA1324Q6UXG2 1013 aaKnown RBP5.85□□□□□ -1.47
SEC13-219ENST00000492602 OTUD6AQ7L8S5 288 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 USP37Q86T82 979 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 ZC3H18Q86VM9 953 aaKnown RBP5.85□□□□□ -1.47
SEC13-219ENST00000492602 TICAM1Q8IUC6 712 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 CACTIN-AS1Q8N1I8 211 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 DCBLD1Q8N8Z6 715 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 CADM4Q8NFZ8 388 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 SPATA20Q8TB22 786 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 SH3RF2Q8TEC5 729 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 IPO4Q8TEX9 1081 aaKnown RBP5.85□□□□□ -1.47
SEC13-219ENST00000492602 RUFY2Q8WXA3 655 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 IGSF8Q969P0 613 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 PRIMPOLQ96LW4 560 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 CYP2S1Q96SQ9 504 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 MMS19Q96T76 1030 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 SEMA3CQ99985 751 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 OXCT2Q9BYC2 517 aaPredicted RBP5.85□□□□□ -1.47
SEC13-219ENST00000492602 SLC25A18Q9H1K4 315 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 XPNPEP1Q9NQW7 623 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 TMPRSS4Q9NRS4 437 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 SLC38A7Q9NVC3 462 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 BARHL2Q9NY43 387 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 WSB2Q9NYS7 404 aaPredicted RBP5.85□□□□□ -1.47
SEC13-219ENST00000492602 WRAP73Q9P2S5 460 aaPredicted RBP5.85□□□□□ -1.47
SEC13-219ENST00000492602 PCDHB8Q9UN66 801 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 MAGED2Q9UNF1 606 aaPredicted RBP5.85□□□□□ -1.47
SEC13-219ENST00000492602 ANKRD6Q9Y2G4 727 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 USP20Q9Y2K6 914 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 V9GY48 417 aaPredicted RBP5.85□□□□□ -1.47
SEC13-219ENST00000492602 LRBAP50851 2863 aa5.85□□□□□ -1.47
SEC13-219ENST00000492602 A0A0A0MRY4 1105 aa5.84□□□□□ -1.47
SEC13-219ENST00000492602 LRRIQ4A6NIV6 560 aa5.84□□□□□ -1.47
SEC13-219ENST00000492602 OR6C75A6NL08 312 aa5.84□□□□□ -1.47
SEC13-219ENST00000492602 METTL12A8MUP2 240 aa5.84□□□□□ -1.47
SEC13-219ENST00000492602 E7EWF7 191 aa5.84□□□□□ -1.47
SEC13-219ENST00000492602 hCG_1984214I3L0E3 225 aa5.84□□□□□ -1.47
SEC13-219ENST00000492602 EML1O00423 815 aa5.84□□□□□ -1.47
SEC13-219ENST00000492602 LAD1O00515 517 aa5.84□□□□□ -1.47
SEC13-219ENST00000492602 DXOO77932 396 aaKnown RBP5.84□□□□□ -1.47
SEC13-219ENST00000492602 AGFG2O95081 481 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms