RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 C2orf15Q8WU43 125 aaKnown RBP14.13□□□□□ -0.15
HDAC3-213ENST00000492506 KIF9Q9HAQ2 790 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 KCND1Q9NSA2 647 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 ADAMTS9Q9P2N4 1935 aa14.13□□□□□ -0.15
HDAC3-213ENST00000492506 SMG1Q96Q15 3661 aaKnown RBP14.12□□□□□ -0.15
HDAC3-213ENST00000492506 MYOFQ9NZM1 2061 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 A0A0B4J269 797 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 NPHP3-ACAD11A0A0J9YXS1 232 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 SRRM3A6NNA2 597 aaPredicted RBP14.12□□□□□ -0.15
HDAC3-213ENST00000492506 PATE3B3GLJ2 98 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 OGTO15294 1046 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 PIGRP01833 764 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 NFICP08651 508 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 CEACAM1P13688 526 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 CSRP1P21291 193 aaKnown RBP14.12□□□□□ -0.15
HDAC3-213ENST00000492506 DDX6P26196 483 aaKnown RBP eCLIP14.12□□□□□ -0.15
HDAC3-213ENST00000492506 CASQ1P31415 396 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 NEK4P51957 841 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 AMPD2Q01433 879 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 BFSP1Q12934 665 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 ZNF268Q14587 947 aaPredicted RBP14.12□□□□□ -0.15
HDAC3-213ENST00000492506 PDGFRLQ15198 375 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 ARSHQ5FYA8 562 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 DAB2IPQ5VWQ8 1189 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 ICE2Q659A1 982 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 PMS2CLQ68D20 193 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 SLC39A4Q6P5W5 647 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 STKLD1Q8NE28 680 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 SPPL2BQ8TCT7 592 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 ECT2Q9H8V3 914 aa14.12□□□□□ -0.15
HDAC3-213ENST00000492506 RPF1Q9H9Y2 349 aaKnown RBP14.12□□□□□ -0.15
HDAC3-213ENST00000492506 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.12□□□□□ -0.15
HDAC3-213ENST00000492506 CPSF3Q9UKF6 684 aaKnown RBP14.12□□□□□ -0.15
HDAC3-213ENST00000492506 TMEM8BA6NDV4 472 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 ANTXRLA6NF34 631 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 TADA3O75528 432 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 PRPHP41219 470 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 GPR15P49685 360 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 SMARCB1Q12824 385 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 CD302Q8IX05 232 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 BICD1Q96G01 975 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 SCNM1Q9BWG6 230 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 CCSER1Q9C0I3 900 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 TMEM9BQ9NQ34 198 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 TMLHEQ9NVH6 421 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 ABI2Q9NYB9 513 aaPredicted RBP14.11□□□□□ -0.15
HDAC3-213ENST00000492506 PSD3Q9NYI0 1048 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 KCND2Q9NZV8 630 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 DSEQ9UL01 958 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 INVSQ9Y283 1065 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 MYO18AQ92614 2054 aaKnown RBP14.11□□□□□ -0.15
HDAC3-213ENST00000492506 LOC400499M0QZD8 3231 aa14.11□□□□□ -0.15
HDAC3-213ENST00000492506 LAD1O00515 517 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 CYB561D2O14569 222 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 HNRNPDLO14979 420 aaKnown RBP14.1□□□□□ -0.15
HDAC3-213ENST00000492506 KHNYNO15037 678 aaKnown RBP14.1□□□□□ -0.15
HDAC3-213ENST00000492506 IVLP07476 585 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 BCKDHBP21953 392 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 GBP1P32455 592 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 NOP2P46087 812 aaKnown RBP14.1□□□□□ -0.15
HDAC3-213ENST00000492506 LIG4P49917 911 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 DGKEP52429 567 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 IRX4P78413 519 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 MTF1Q14872 753 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 ZNF77Q15935 545 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 TAF12Q16514 161 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 WSCD1Q658N2 575 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 CC2D1AQ6P1N0 951 aaPredicted RBP14.1□□□□□ -0.15
HDAC3-213ENST00000492506 RASSF3Q86WH2 238 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 CCDC83Q8IWF9 413 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 IQUBQ8NA54 791 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 MNS1Q8NEH6 495 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 OSCP1Q8WVF1 389 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 CD101Q93033 1021 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 ACDQ96AP0 544 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 FAM212AQ96EL1 285 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 SLC22A12Q96S37 553 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 PYM1Q9BRP8 204 aaKnown RBP14.1□□□□□ -0.15
HDAC3-213ENST00000492506 LLPHQ9BRT6 129 aaKnown RBP14.1□□□□□ -0.15
HDAC3-213ENST00000492506 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.1□□□□□ -0.15
HDAC3-213ENST00000492506 LARSQ9P2J5 1176 aaKnown RBP14.1□□□□□ -0.15
HDAC3-213ENST00000492506 PYCARDQ9ULZ3 195 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 DERAQ9Y315 318 aa14.1□□□□□ -0.15
HDAC3-213ENST00000492506 H0YCG3 227 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 KIF1CO43896 1103 aaKnown RBP14.09□□□□□ -0.15
HDAC3-213ENST00000492506 SLU7O95391 586 aaKnown RBP14.09□□□□□ -0.15
HDAC3-213ENST00000492506 PLA2G4BP0C869 781 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 PSEN1P49768 467 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 HNRNPH2P55795 449 aaKnown RBP14.09□□□□□ -0.15
HDAC3-213ENST00000492506 USP4Q13107 963 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 TMEM132DQ14C87 1099 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 ACAP1Q15027 740 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 ZRSR1Q15695 479 aaKnown RBP14.09□□□□□ -0.15
HDAC3-213ENST00000492506 EML3Q32P44 896 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 SDHAF4Q5VUM1 108 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 CEP135Q66GS9 1140 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 DTHD1Q6ZMT9 781 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 FILIP1Q7Z7B0 1213 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 METTL23Q86XA0 190 aa14.09□□□□□ -0.15
HDAC3-213ENST00000492506 THEM5Q8N1Q8 247 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms