RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-212ENST00000492407 DCDC2BA2VCK2 349 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 OTOL1A6NHN0 477 aaPredicted RBP9.77□□□□□ -0.85
HDAC3-212ENST00000492407 TTC36A6NLP5 189 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 TRIM66O15016 1216 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 EIF3DO15371 548 aaKnown RBP eCLIP9.77□□□□□ -0.85
HDAC3-212ENST00000492407 PPP6R2O75170 966 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 TACC1O75410 805 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 STAU1O95793 577 aaKnown RBP9.77□□□□□ -0.85
HDAC3-212ENST00000492407 KRT19P08727 400 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 HDCP19113 662 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 GJA4P35212 333 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 IFNAR2P48551 515 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 CASP5P51878 434 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 WNT7BP56706 349 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 USP4Q13107 963 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 ZNF77Q15935 545 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 LPAL2Q16609 132 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 PLA2G2CQ5R387 149 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 HEATR6Q6AI08 1181 aaKnown RBP9.77□□□□□ -0.85
HDAC3-212ENST00000492407 WDR49Q8IV35 697 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 ZNF507Q8TCN5 953 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 CHFRQ96EP1 664 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 HPDLQ96IR7 371 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 C8orf48Q96LL4 319 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 CLIC6Q96NY7 704 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 TTLL2Q9BWV7 592 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 IKZF4Q9H2S9 585 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 MAGEF1Q9HAY2 307 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 PDE11AQ9HCR9 933 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 TBC1D7Q9P0N9 293 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 CGNQ9P2M7 1197 aaKnown RBP9.77□□□□□ -0.85
HDAC3-212ENST00000492407 TICRRQ7Z2Z1 1910 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 NCOR2Q9Y618 2525 aa9.77□□□□□ -0.85
HDAC3-212ENST00000492407 SLC9A3R1O14745 358 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-212ENST00000492407 AXIN1O15169 862 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 RNF40O75150 1001 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 TADA3O75528 432 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 RHOBTB1O94844 696 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 NFATC1O95644 943 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 APBB3O95704 486 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 CKMP06732 381 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 CCDC192P0DO97 292 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 GPR15P49685 360 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 NOP14P78316 857 aaKnown RBP9.76□□□□□ -0.85
HDAC3-212ENST00000492407 SLC7A9P82251 487 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 SRSF5Q13243 272 aaKnown RBP9.76□□□□□ -0.85
HDAC3-212ENST00000492407 KCNB1Q14721 858 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 EML3Q32P44 896 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 TRIM68Q6AZZ1 485 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 IL31Q6EBC2 164 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 DENND5BQ6ZUT9 1274 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 EPM2AIP1Q7L775 607 aaPredicted RBP9.76□□□□□ -0.85
HDAC3-212ENST00000492407 OSTM1Q86WC4 334 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 IQUBQ8NA54 791 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 LINC00301Q8NCQ3 95 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 MYCBPAPQ8TBZ2 947 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 KBTBD7Q8WVZ9 684 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 CD101Q93033 1021 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 USP28Q96RU2 1077 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 DUSP9Q99956 384 aaKnown RBP9.76□□□□□ -0.85
HDAC3-212ENST00000492407 SYT15Q9BQS2 421 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 MTMR12Q9C0I1 747 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 VPS45Q9NRW7 570 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 C2orf42Q9NWW7 574 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 TRPM5Q9NZQ8 1165 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 TSC2P49815 1807 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 UBE4BO95155 1302 aa9.76□□□□□ -0.85
HDAC3-212ENST00000492407 A0A0A0MRY4 1105 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 GOLGA8IPA6NC78 632 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 GOLGA8JA6NMD2 632 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 TM4SF5O14894 197 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 PRPF6O94906 941 aaKnown RBP9.75□□□□□ -0.85
HDAC3-212ENST00000492407 YEATS4O95619 227 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 OLFM2O95897 454 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 EGFP01133 1207 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 ARSAP15289 507 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 ACAT1P24752 427 aaKnown RBP9.75□□□□□ -0.85
HDAC3-212ENST00000492407 ANXA13P27216 316 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 ATICP31939 592 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 GNL1P36915 607 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-212ENST00000492407 EIF2DP41214 584 aaKnown RBP9.75□□□□□ -0.85
HDAC3-212ENST00000492407 AP3M2P53677 418 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 PSMD2Q13200 908 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 PSMD6Q15008 389 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 ELF2Q15723 593 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 E2F4Q16254 413 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 HSF5Q4G112 596 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-212ENST00000492407 PPM1JQ5JR12 505 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 TRAPPC11Q7Z392 1133 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 DDX42Q86XP3 938 aaKnown RBP eCLIP9.75□□□□□ -0.85
HDAC3-212ENST00000492407 SCN4BQ8IWT1 228 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 C12orf56Q8IXR9 622 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 C12orf50Q8NA57 414 aaPredicted RBP9.75□□□□□ -0.85
HDAC3-212ENST00000492407 ZSWIM2Q8NEG5 633 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 OR5B17Q8NGF7 314 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 RIN3Q8TB24 985 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 SH3RF2Q8TEC5 729 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 TMEM174Q8WUU8 243 aa9.75□□□□□ -0.85
HDAC3-212ENST00000492407 OVCA2Q8WZ82 227 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms