RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 EMC1Q8N766 993 aa16.92■□□□□ 0.3
SEMA4D-220ENST00000492386 CPXM1Q96SM3 734 aa16.92■□□□□ 0.3
SEMA4D-220ENST00000492386 NXF1Q9UBU9 619 aaKnown RBP16.92■□□□□ 0.3
SEMA4D-220ENST00000492386 ZBTB42B2RXF5 422 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 ATP5HO75947 161 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 HIRAP54198 1017 aaPredicted RBP16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 HADHQ16836 314 aaKnown RBP16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 SMYD5Q6GMV2 418 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 C3orf62Q6ZUJ4 267 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 XYLT1Q86Y38 959 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 ZBTB8OSQ8IWT0 167 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 UNC45BQ8IWX7 931 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 LRRC71Q8N4P6 559 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 FBXO36Q8NEA4 188 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 RSAD2Q8WXG1 361 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 SEPT1Q8WYJ6 367 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 PAFAH2Q99487 392 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 PTPRHQ9HD43 1115 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 NOP53Q9NZM5 478 aaKnown RBP16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 BRCA1P38398 1863 aaKnown RBP16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 B4GALT4O60513 344 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 DCTN3O75935 186 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 RPSAP08865 295 aaKnown RBP16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 TARSP26639 723 aaKnown RBP16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 RAD23BP54727 409 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 MXD4Q14582 209 aaPredicted RBP16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 PARP6Q2NL67 630 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 MPZL3Q6UWV2 235 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 TSHZ1Q6ZSZ6 1077 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 ZNF276Q8N554 614 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 TAB3Q8N5C8 712 aaPredicted RBP16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 DCAKDQ8WVC6 231 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 TMEM237Q96Q45 408 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 RAB3IPQ96QF0 476 aaPredicted RBP16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 BCO2Q9BYV7 579 aa16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 METTL5Q9NRN9 209 aaKnown RBP16.91■□□□□ 0.3
SEMA4D-220ENST00000492386 IGKV6-21A0A0C4DH24 114 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 MED7O43513 233 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 TNNC2P02585 160 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 ERBB2P04626 1255 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 T-ENOLP0DO92 83 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 ADRA1DP25100 572 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 MARK3P27448 753 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 ALDH3A1P30838 453 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 OSTNP61366 133 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 TAF5Q15542 800 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 METTL7BQ6UX53 244 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 CEP120Q8N960 986 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 FAM167AQ96KS9 214 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 SDCBP2Q9H190 292 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 HAO1Q9UJM8 370 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 PPME1Q9Y570 386 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 PTPRFP10586 1907 aa16.9■□□□□ 0.3
SEMA4D-220ENST00000492386 WFS1O76024 890 aa16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 CDH8P55286 799 aa16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 ATP11AP98196 1134 aa16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 MTM1Q13496 603 aa16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 LY6KQ17RY6 165 aa16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 KLHL38Q2WGJ6 581 aa16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 SH3D19Q5HYK7 790 aa16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 LBX2Q6XYB7 198 aa16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 TRIM50Q86XT4 487 aa16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 CMASQ8NFW8 434 aaPredicted RBP16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 ANKRD36BP1Q96IX9 119 aa16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 BTBD7Q9P203 1132 aa16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 PCSK1NQ9UHG2 260 aa16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 SIX4Q9UIU6 781 aa16.89■□□□□ 0.3
SEMA4D-220ENST00000492386 APOC4-APOC2K7ER74 178 aa16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 APOC2P02655 101 aa16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 GBP2P32456 591 aaPredicted RBP16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 ORC1Q13415 861 aa16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 NOL9Q5SY16 702 aaKnown RBP16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 TREML2Q5T2D2 321 aa16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 EEF1DP3Q658K8 133 aa16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 APOBEC3FQ8IUX4 373 aaKnown RBP16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 TMEM130Q8N3G9 435 aa16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 BANPQ8N9N5 519 aa16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 FAM71DQ8N9W8 422 aa16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 KCTD6Q8NC69 237 aa16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 INPP5DQ92835 1189 aa16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 SLC7A6OSQ96CW6 309 aaPredicted RBP16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 WDR35Q9P2L0 1181 aa16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 XPO7Q9UIA9 1087 aaKnown RBP16.89■□□□□ 0.29
SEMA4D-220ENST00000492386 B4GALT5O43286 388 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 TGFB3P10600 412 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 MIPP30301 263 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 EIF3EP60228 445 aaKnown RBP16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 BBS9Q3SYG4 887 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 ATF7IP2Q5U623 682 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 EEPD1Q7L9B9 569 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 CDR2LQ86X02 465 aaPredicted RBP16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 RFX6Q8HWS3 928 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 TMEM192Q8IY95 271 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 AGGF1Q8N302 714 aaeCLIP16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 TCP10LQ8TDR4 215 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 TWNKQ96RR1 684 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 C2orf40Q9H1Z8 148 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 ACKR2O00590 384 aa16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 GAS2O43903 313 aaKnown RBP16.88■□□□□ 0.29
SEMA4D-220ENST00000492386 NRLP54845 237 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms