RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 UBAP1Q9NZ09 502 aa6.73□□□□□ -1.33
CCDC6-202ENST00000491922 CNTN3Q9P232 1028 aa6.73□□□□□ -1.33
CCDC6-202ENST00000491922 INPP5FQ9Y2H2 1132 aa6.73□□□□□ -1.33
CCDC6-202ENST00000491922 ZNFX1Q9P2E3 1918 aaKnown RBP6.73□□□□□ -1.33
CCDC6-202ENST00000491922 SF3B1O75533 1304 aaKnown RBP eCLIP6.73□□□□□ -1.33
CCDC6-202ENST00000491922 SNED1Q8TER0 1413 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 CYP3A7-CYP3A51PA0A087WV96 503 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 CAPN8A6NHC0 703 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 USP17L5A8MUK1 530 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 GOLGA8RI6L899 631 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 FAM13AO94988 1023 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 SRGAP2CP0DJJ0 459 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 SRGAP2BP0DMP2 458 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 FDX1P10109 184 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 TSHRP16473 764 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 CYP3A7P24462 503 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 STAT3P40763 770 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 CYP2J2P51589 502 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 ARSEP51690 589 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 GPX6P59796 221 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 NAA20P61599 178 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 MYBPC1Q00872 1141 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 PFKPQ01813 784 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 GPS1Q13098 491 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 BCL2A1Q16548 175 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 RABGAP1LQ5R372 815 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 HP1BP3Q5SSJ5 553 aaPredicted RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 RNASEH2BQ5TBB1 312 aaKnown RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 ACAD10Q6JQN1 1059 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 DRICH1Q6PGQ1 229 aaPredicted RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 FBXO33Q7Z6M2 555 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 PCGF5Q86SE9 256 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 SLC9A9Q8IVB4 645 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 MARCH10Q8NA82 808 aaPredicted RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 TTC13Q8NBP0 860 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 PYROXD1Q8WU10 500 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 DCAKDQ8WVC6 231 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 MBOAT7Q96N66 472 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 FAM111AQ96PZ2 611 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 HEMGNQ9BXL5 484 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 ADAM33Q9BZ11 813 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 GLT8D2Q9H1C3 349 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 C12orf65Q9H3J6 166 aaKnown RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 SMYD3Q9H7B4 428 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 AVENQ9NQS1 362 aaPredicted RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 AGPAT3Q9NRZ7 376 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 TBC1D23Q9NUY8 699 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 RRN3Q9NYV6 651 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 TMOD2Q9NZR1 351 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 AHDC1Q5TGY3 1603 aaPredicted RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 PNMA6FA0A0J9YX94 578 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 DENND3A2RUS2 1198 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 MEI4A8MW99 385 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 PRR5-ARHGAP8B1AHC4 643 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 E5RJQ4 531 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 H3BNX3 289 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 H3BSA7 217 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 MEIS1O00470 390 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 FBP2O00757 339 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 ITM2AO43736 263 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 LIASO43766 372 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 KLHL2O95198 593 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 CRTAMO95727 393 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 CYP19A1P11511 503 aaPredicted RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 PPARGP37231 505 aaPredicted RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 ALDH18A1P54886 795 aaKnown RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 NOP14P78316 857 aaKnown RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 ARHGAP8P85298 464 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 TFDP1Q14186 410 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 EFTUD2Q15029 972 aaKnown RBP eCLIP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 HIF1AQ16665 826 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 EPC2Q52LR7 807 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 RARS2Q5T160 578 aaKnown RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 CIAPIN1Q6FI81 312 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 MOXD1Q6UVY6 613 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 DZIP1Q86YF9 867 aaKnown RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 ARID3BQ8IVW6 561 aaPredicted RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 RHOT1Q8IXI2 618 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 KATNAL2Q8IYT4 538 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 CCDC33Q8N5R6 958 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 SCAIQ8N9R8 606 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 SLC44A5Q8NCS7 719 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 RAB3IL1Q8TBN0 382 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 ACTRT2Q8TDY3 377 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 TRIM11Q96F44 468 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 PRPF18Q99633 342 aaKnown RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 ACP6Q9NPH0 428 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 ITGA11Q9UKX5 1188 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 PSMD13Q9UNM6 376 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 EXOC7Q9UPT5 735 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 ATF5Q9Y2D1 282 aaPredicted RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 AP4B1Q9Y6B7 739 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 SQORQ9Y6N5 450 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 CLUHO75153 1309 aa6.72□□□□□ -1.33
CCDC6-202ENST00000491922 RBBP6Q7Z6E9 1792 aaKnown RBP6.72□□□□□ -1.33
CCDC6-202ENST00000491922 TBX3O15119 743 aa6.71□□□□□ -1.33
CCDC6-202ENST00000491922 POLR2MP0CAP2 368 aa6.71□□□□□ -1.33
CCDC6-202ENST00000491922 SPATA31C1P0DKV0 1188 aa6.71□□□□□ -1.33
CCDC6-202ENST00000491922 ZNF12P17014 697 aa6.71□□□□□ -1.33
CCDC6-202ENST00000491922 ZNF23P17027 643 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms