RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 PI4K2AQ9BTU6 479 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 SLC46A2Q9BY10 475 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 MTMR12Q9C0I1 747 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 NAT10Q9H0A0 1025 aaKnown RBP11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 EPC1Q9H2F5 836 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 KCTD10Q9H3F6 313 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 RBAKQ9NYW8 714 aaPredicted RBP11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 HSFX1Q9UBD0 423 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 SIX4Q9UIU6 781 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 AGAP1Q9UPQ3 857 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 CCL26Q9Y258 94 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 PCDHGA2Q9Y5H1 932 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 ATG2BQ96BY7 2078 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 CFAP47Q6ZTR5 3102 aa11.81□□□□□ -0.52
TMEM39A-211ENST00000491685 SPECC1L-ADORA2AF8WAN1 911 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 TADA3O75528 432 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 NR3C1P04150 777 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 ERCC5P28715 1186 aaPredicted RBP11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 CTHP32929 405 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 HOXD13P35453 343 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 PSMC2P35998 433 aaKnown RBP11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 AP3M2P53677 418 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 SMARCB1Q12824 385 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 BFSP1Q12934 665 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 PAK1Q13153 545 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 PPP2R5DQ14738 602 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 VEPH1Q14D04 833 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 CEP135Q66GS9 1140 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 KLHL10Q6JEL2 608 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 FOXR2Q6PJQ5 311 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 THEM5Q8N1Q8 247 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 SPPL2BQ8TCT7 592 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 CSGALNACT1Q8TDX6 532 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 ATRIPQ8WXE1 791 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 CHFRQ96EP1 664 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 TASP1Q9H6P5 420 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 PDE11AQ9HCR9 933 aa11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 DDX43Q9NXZ2 648 aaKnown RBP11.8□□□□□ -0.52
TMEM39A-211ENST00000491685 USP24Q9UPU5 2620 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 CHD6Q8TD26 2715 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 MYBPHLA2RUH7 354 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 MAPK13O15264 365 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 STX10O60499 249 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 GNA14O95837 355 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 TNNI1P19237 187 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 NR2F2P24468 414 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 TUFMP49411 452 aaKnown RBP11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 KPNA1P52294 538 aaPredicted RBP11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 SRSF5Q13243 272 aaKnown RBP11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 PON2Q15165 354 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 LPAL2Q16609 132 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 DUOXA2Q1HG44 320 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 ARHGAP15Q53QZ3 475 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 INTS6LQ5JSJ4 861 aaKnown RBP11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 ANKRD40Q6AI12 368 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 TRIM68Q6AZZ1 485 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 FILIP1Q7Z7B0 1213 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 CBWD2Q8IUF1 395 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 SMYD4Q8IYR2 804 aaPredicted RBP11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 GPR161Q8N6U8 529 aaKnown RBP11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 OR5B17Q8NGF7 314 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 BPIFB1Q8TDL5 484 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 NELFBQ8WX92 580 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 MSANTD3Q96H12 275 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 IER2Q9BTL4 223 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 METTL14Q9HCE5 456 aaKnown RBP11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 DMAC2Q9NW81 257 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 NCDNQ9UBB6 729 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 RWDD2AQ9UIY3 292 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 ZMYM5Q9UJ78 669 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 PCDHB5Q9Y5E4 795 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 SPTBN2O15020 2390 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 RALGAPA1Q6GYQ0 2036 aa11.79□□□□□ -0.52
TMEM39A-211ENST00000491685 OTOL1A6NHN0 477 aaPredicted RBP11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 PPP1R3GB7ZBB8 358 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 K7ESF4 209 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 DPYSL4O14531 572 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 CAVIN2O95810 425 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 TNNC2P02585 160 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 F11P03951 625 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 KRT19P08727 400 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 CCDC192P0DO97 292 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 EPB41P11171 864 aaKnown RBP11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 CYP2F1P24903 491 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 CDC25CP30307 473 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 PNPLA4P41247 253 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 SNRNP35Q16560 246 aaKnown RBP11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 DDR2Q16832 855 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 ARHGAP29Q52LW3 1261 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 NAIF1Q69YI7 327 aaPredicted RBP11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 TXNDC8Q6A555 127 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 PKN3Q6P5Z2 889 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 INTS8Q75QN2 995 aaKnown RBP11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 DCP1BQ8IZD4 617 aaKnown RBP11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 CSGALNACT2Q8N6G5 542 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 MAB21L3Q8N8X9 362 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 C2orf15Q8WU43 125 aaKnown RBP11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 USP13Q92995 863 aaPredicted RBP11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 ANKRD36BP1Q96IX9 119 aa11.78□□□□□ -0.52
TMEM39A-211ENST00000491685 CEP63Q96MT8 703 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms