RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 STAU1O95793 577 aaKnown RBP13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 C4BPAP04003 597 aaKnown RBP13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 NR3C1P04150 777 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 MAGEA11P43364 429 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 RPS9P46781 194 aaKnown RBP13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 CACNA2D1P54289 1103 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 TNK2Q07912 1038 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 WDR72Q3MJ13 1102 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 ZNF658Q5TYW1 1059 aaPredicted RBP13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 TXNDC11Q6PKC3 985 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 CMTM8Q8IZV2 173 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 MAB21L3Q8N8X9 362 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 TRIML1Q8N9V2 468 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 TTC8Q8TAM2 541 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 SPATA20Q8TB22 786 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 GOLGA5Q8TBA6 731 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 USP13Q92995 863 aaPredicted RBP13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 NKD2Q969F2 451 aaPredicted RBP13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 CHFRQ96EP1 664 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 TRMT2BQ96GJ1 504 aaKnown RBP13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 PCED1BQ96HM7 432 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 FUBP3Q96I24 572 aaKnown RBP eCLIP13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 MMS19Q96T76 1030 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 DPEP3Q9H4B8 488 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 SPATA6Q9NWH7 488 aaPredicted RBP13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 OBP2AQ9NY56 170 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 GTSE1Q9NYZ3 720 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 TMEM63CQ9P1W3 806 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 CDH9Q9ULB4 789 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 NDRG2Q9UN36 371 aaKnown RBP13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 MAGED2Q9UNF1 606 aaPredicted RBP13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 MAPK8IP1Q9UQF2 711 aa13.56□□□□□ -0.24
SEC61A1-206ENST00000491668 ANAPC1Q9H1A4 1944 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 OTOL1A6NHN0 477 aaPredicted RBP13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 MAN2B1O00754 1011 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 CSH1P0DML2 217 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 CSH2P0DML3 217 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 CHRNB1P11230 501 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 BDNFP23560 247 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 CCNE1P24864 410 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 GNL1P36915 607 aaPredicted RBP13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 MLLT6P55198 1093 aaPredicted RBP13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 USP46P62068 366 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 RPL10AP62906 217 aaKnown RBP13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 MTAPQ13126 283 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 GAS6Q14393 721 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 TAF12Q16514 161 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 ARHGAP15Q53QZ3 475 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 MON1AQ86VX9 555 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 SPATA2LQ8IUW3 424 aaPredicted RBP13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 MYCBPAPQ8TBZ2 947 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 BPIFB1Q8TDL5 484 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 FAM3CQ92520 227 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 NELL1Q92832 810 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 FAM83CQ9BQN1 747 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 SDCBP2Q9H190 292 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 VRTNQ9H8Y1 702 aa13.55□□□□□ -0.24
SEC61A1-206ENST00000491668 TDGF1P13385 188 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 CTHP32929 405 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 PPP1R2P41236 205 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 CDH8P55286 799 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 MORC3Q14149 939 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 ARHGAP29Q52LW3 1261 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 MDH1BQ5I0G3 518 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 TSSK4Q6SA08 328 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 SCN4BQ8IWT1 228 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 YAF2Q8IY57 180 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 SMYD4Q8IYR2 804 aaPredicted RBP13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 CELF5Q8N6W0 485 aaKnown RBP13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 GCNAQ96QF7 691 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 CYP2S1Q96SQ9 504 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 CHRDQ9H2X0 955 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 SMYD3Q9H7B4 428 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 LMAN1LQ9HAT1 526 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 HPS4Q9NQG7 708 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 PRMT8Q9NR22 394 aaPredicted RBP13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 GCNT4Q9P109 453 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 MAGEC2Q9UBF1 373 aaPredicted RBP13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 NXF1Q9UBU9 619 aaKnown RBP13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 DACH1Q9UI36 760 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 TRAF3IP3Q9Y228 551 aa13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 MRPS17Q9Y2R5 130 aaKnown RBP13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 R3HCC1Q9Y3T6 440 aaKnown RBP13.54□□□□□ -0.24
SEC61A1-206ENST00000491668 SOBPA7XYQ1 873 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 SPECC1L-ADORA2AF8WAN1 911 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 DPYSL4O14531 572 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 PSMA7O14818 248 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 FAM163BP0C2L3 166 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 PTPN1P18031 435 aaKnown RBP13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 ATICP31939 592 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 MAGEA9P43362 315 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 RAP1GAPP47736 663 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 TNNC1P63316 161 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 CYP27A1Q02318 531 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 TRPC3Q13507 836 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 NCOA4Q13772 614 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 ZNF528Q3MIS6 628 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 ZACNQ401N2 412 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 ZCWPW2Q504Y3 356 aa13.53□□□□□ -0.24
SEC61A1-206ENST00000491668 KLHL10Q6JEL2 608 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms