RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 LRIG1Q96JA1 1093 aa11.94□□□□□ -0.5
NCSTN-214ENST00000491390 FAM83CQ9BQN1 747 aa11.94□□□□□ -0.5
NCSTN-214ENST00000491390 CCDC86Q9H6F5 360 aaKnown RBP11.94□□□□□ -0.5
NCSTN-214ENST00000491390 TRPC7Q9HCX4 862 aa11.94□□□□□ -0.5
NCSTN-214ENST00000491390 THG1LQ9NWX6 298 aaKnown RBP11.94□□□□□ -0.5
NCSTN-214ENST00000491390 DKK4Q9UBT3 224 aa11.94□□□□□ -0.5
NCSTN-214ENST00000491390 INVSQ9Y283 1065 aa11.94□□□□□ -0.5
NCSTN-214ENST00000491390 UBR5O95071 2799 aaPredicted RBP11.94□□□□□ -0.5
NCSTN-214ENST00000491390 MGAQ8IWI9 3026 aa11.94□□□□□ -0.5
NCSTN-214ENST00000491390 KIAA1549LQ6ZVL6 1849 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 TNRC6BQ9UPQ9 1833 aaKnown RBP11.93□□□□□ -0.5
NCSTN-214ENST00000491390 GOLGA8IPA6NC78 632 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 GOLGA8JA6NMD2 632 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 TK2O00142 265 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 BCKDHBP21953 392 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 CYP2F1P24903 491 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 ADSSP30520 456 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 POLR2BP30876 1174 aaKnown RBP11.93□□□□□ -0.5
NCSTN-214ENST00000491390 AVPR1AP37288 418 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 GALK1P51570 392 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 TFAMQ00059 246 aaKnown RBP11.93□□□□□ -0.5
NCSTN-214ENST00000491390 GTF2BQ00403 316 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 GRSF1Q12849 480 aaKnown RBP eCLIP11.93□□□□□ -0.5
NCSTN-214ENST00000491390 BFSP1Q12934 665 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 CCNI2Q6ZMN8 369 aaPredicted RBP11.93□□□□□ -0.5
NCSTN-214ENST00000491390 OSTM1Q86WC4 334 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 CD302Q8IX05 232 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 PDCL2Q8N4E4 241 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 NOC3LQ8WTT2 800 aaKnown RBP11.93□□□□□ -0.5
NCSTN-214ENST00000491390 POMGNT1Q8WZA1 660 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 LARP4BQ92615 738 aaKnown RBP11.93□□□□□ -0.5
NCSTN-214ENST00000491390 EZH1Q92800 747 aaPredicted RBP11.93□□□□□ -0.5
NCSTN-214ENST00000491390 EPSTI1Q96J88 318 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 SLC22A12Q96S37 553 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 CYP2S1Q96SQ9 504 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 DSEQ9UL01 958 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 RAXQ9Y2V3 346 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 DERAQ9Y315 318 aa11.93□□□□□ -0.5
NCSTN-214ENST00000491390 KPNA7A9QM74 516 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 EIF5BO60841 1220 aaKnown RBP11.92□□□□□ -0.5
NCSTN-214ENST00000491390 PRB1P04280 392 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 ITGB3P05106 788 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 ENGP17813 658 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 PSMD2Q13200 908 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 SF3A1Q15459 793 aaKnown RBP11.92□□□□□ -0.5
NCSTN-214ENST00000491390 TRIM61Q5EBN2 209 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 PEAR1Q5VY43 1037 aaPredicted RBP11.92□□□□□ -0.5
NCSTN-214ENST00000491390 RASSF3Q86WH2 238 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 RPLP0P6Q8NHW5 317 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 SPPL2BQ8TCT7 592 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 ADAMTS14Q8WXS8 1223 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 KCNN1Q92952 543 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 AK8Q96MA6 479 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 TSPAN18Q96SJ8 248 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 FAM213AQ9BRX8 229 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 FGFBP2Q9BYJ0 223 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 ASB7Q9H672 318 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 TDP1Q9NUW8 608 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 HSFX1Q9UBD0 423 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 L1RE1Q9UN81 338 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 AGAP1Q9UPQ3 857 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 C2CD2Q9Y426 696 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 KIF3AQ9Y496 699 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 PCDHB5Q9Y5E4 795 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.92□□□□□ -0.5
NCSTN-214ENST00000491390 WNT6Q9Y6F9 365 aa11.92□□□□□ -0.5
NCSTN-214ENST00000491390 MYO16Q9Y6X6 1858 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 SCAMP3O14828 347 aaKnown RBP11.91□□□□□ -0.5
NCSTN-214ENST00000491390 GBP1P32455 592 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 GJA4P35212 333 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 CASP5P51878 434 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 DMC1Q14565 340 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 RABEP1Q15276 862 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 SV2CQ496J9 727 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 FBXO43Q4G163 708 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 LMBRD2Q68DH5 695 aaPredicted RBP11.91□□□□□ -0.5
NCSTN-214ENST00000491390 CC2D1AQ6P1N0 951 aaPredicted RBP11.91□□□□□ -0.5
NCSTN-214ENST00000491390 SLC23A3Q6PIS1 610 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 ZNF720Q7Z2F6 126 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 LURAP1LQ8IV03 231 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 SCN4BQ8IWT1 228 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 DCP1BQ8IZD4 617 aaKnown RBP11.91□□□□□ -0.5
NCSTN-214ENST00000491390 KCTD17Q8N5Z5 321 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 ARL14EPQ8N8R7 260 aaPredicted RBP11.91□□□□□ -0.5
NCSTN-214ENST00000491390 C1orf127Q8N9H9 656 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 OLIG1Q8TAK6 271 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 MDM1Q8TC05 714 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 MRPS31Q92665 395 aaKnown RBP11.91□□□□□ -0.5
NCSTN-214ENST00000491390 UBL7Q96S82 380 aaPredicted RBP11.91□□□□□ -0.5
NCSTN-214ENST00000491390 DDX43Q9NXZ2 648 aaKnown RBP11.91□□□□□ -0.5
NCSTN-214ENST00000491390 GTF3C4Q9UKN8 822 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 SMC3Q9UQE7 1217 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 CLIC4Q9Y696 253 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 STYXL1Q9Y6J8 313 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 ANAPC1Q9H1A4 1944 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 PLXNB3Q9ULL4 1909 aa11.91□□□□□ -0.5
NCSTN-214ENST00000491390 PCDH15Q96QU1 1955 aa11.9□□□□□ -0.5
NCSTN-214ENST00000491390 COL12A1Q99715 3063 aa11.9□□□□□ -0.5
NCSTN-214ENST00000491390 URB1O60287 2271 aaKnown RBP11.9□□□□□ -0.5
NCSTN-214ENST00000491390 A0A087WV48 116 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms