RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 FZD5Q13467 585 aa33.47■■■□□ 2.95
LDB1-204ENST00000490751 NFIL3Q16649 462 aa33.47■■■□□ 2.95
LDB1-204ENST00000490751 MON1AQ86VX9 555 aa33.47■■■□□ 2.95
LDB1-204ENST00000490751 FMR1NBQ8N0W7 255 aaPredicted RBP33.47■■■□□ 2.95
LDB1-204ENST00000490751 ELMO3Q96BJ8 720 aa33.47■■■□□ 2.95
LDB1-204ENST00000490751 SOBPA7XYQ1 873 aa33.46■■■□□ 2.95
LDB1-204ENST00000490751 PTPN1P18031 435 aaKnown RBP33.46■■■□□ 2.95
LDB1-204ENST00000490751 CCNE1P24864 410 aa33.46■■■□□ 2.95
LDB1-204ENST00000490751 RPS9P46781 194 aaKnown RBP33.46■■■□□ 2.95
LDB1-204ENST00000490751 KPNA1P52294 538 aaPredicted RBP33.46■■■□□ 2.95
LDB1-204ENST00000490751 MLLT6P55198 1093 aaPredicted RBP33.46■■■□□ 2.95
LDB1-204ENST00000490751 ZACNQ401N2 412 aa33.46■■■□□ 2.95
LDB1-204ENST00000490751 ASCL5Q7RTU5 278 aa33.46■■■□□ 2.95
LDB1-204ENST00000490751 MAML2Q8IZL2 1156 aaPredicted RBP33.46■■■□□ 2.95
LDB1-204ENST00000490751 ZNF687Q8N1G0 1237 aa33.46■■■□□ 2.95
LDB1-204ENST00000490751 SPATA17Q96L03 361 aa33.46■■■□□ 2.95
LDB1-204ENST00000490751 CCL26Q9Y258 94 aa33.46■■■□□ 2.95
LDB1-204ENST00000490751 ANAPC1Q9H1A4 1944 aa33.45■■■□□ 2.95
LDB1-204ENST00000490751 SP9P0CG40 484 aa33.45■■■□□ 2.95
LDB1-204ENST00000490751 SOX9P48436 509 aa33.45■■■□□ 2.95
LDB1-204ENST00000490751 CDH8P55286 799 aa33.45■■■□□ 2.95
LDB1-204ENST00000490751 PNOCQ13519 176 aa33.45■■■□□ 2.95
LDB1-204ENST00000490751 SCARA5Q6ZMJ2 495 aa33.45■■■□□ 2.95
LDB1-204ENST00000490751 USP13Q92995 863 aaPredicted RBP33.45■■■□□ 2.95
LDB1-204ENST00000490751 NKD2Q969F2 451 aaPredicted RBP33.45■■■□□ 2.95
LDB1-204ENST00000490751 MSANTD3Q96H12 275 aa33.45■■■□□ 2.95
LDB1-204ENST00000490751 THG1LQ9NWX6 298 aaKnown RBP33.45■■■□□ 2.95
LDB1-204ENST00000490751 GTSE1Q9NYZ3 720 aa33.45■■■□□ 2.95
LDB1-204ENST00000490751 PRR23AA6NEV1 266 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 MAPK13O15264 365 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 LAMTOR5O43504 91 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 AKAP3O75969 853 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 ANXA13P27216 316 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 RAP1GAPP47736 663 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 PLCB2Q00722 1185 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 C1orf220Q5T0J3 134 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 SV2AQ7L0J3 742 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 B3GALNT2Q8NCR0 500 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 TTC8Q8TAM2 541 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 CEP295NLQ96MC4 621 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 C8orf33Q9H7E9 229 aaPredicted RBP33.44■■■□□ 2.94
LDB1-204ENST00000490751 KIF9Q9HAQ2 790 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 TRPC7Q9HCX4 862 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 TDP1Q9NUW8 608 aa33.44■■■□□ 2.94
LDB1-204ENST00000490751 IKBKBO14920 756 aa33.43■■■□□ 2.94
LDB1-204ENST00000490751 TRIM66O15016 1216 aa33.43■■■□□ 2.94
LDB1-204ENST00000490751 VAMP7P51809 220 aa33.43■■■□□ 2.94
LDB1-204ENST00000490751 SMYD4Q8IYR2 804 aaPredicted RBP33.43■■■□□ 2.94
LDB1-204ENST00000490751 SDCBP2Q9H190 292 aa33.43■■■□□ 2.94
LDB1-204ENST00000490751 R4GN57 208 aa33.43■■■□□ 2.94
LDB1-204ENST00000490751 ZFHX2Q9C0A1 2572 aaPredicted RBP33.43■■■□□ 2.94
LDB1-204ENST00000490751 FANCMQ8IYD8 2048 aa33.42■■■□□ 2.94
LDB1-204ENST00000490751 F8VP50 259 aa33.42■■■□□ 2.94
LDB1-204ENST00000490751 RPL13P26373 211 aaKnown RBP33.42■■■□□ 2.94
LDB1-204ENST00000490751 TNK2Q07912 1038 aa33.42■■■□□ 2.94
LDB1-204ENST00000490751 SGSM1Q2NKQ1 1148 aa33.42■■■□□ 2.94
LDB1-204ENST00000490751 DENND5BQ6ZUT9 1274 aa33.42■■■□□ 2.94
LDB1-204ENST00000490751 FAM186BQ8IYM0 893 aa33.42■■■□□ 2.94
LDB1-204ENST00000490751 ZNF518BQ9C0D4 1074 aa33.42■■■□□ 2.94
LDB1-204ENST00000490751 ELOVL4Q9GZR5 314 aa33.42■■■□□ 2.94
LDB1-204ENST00000490751 DMDP11532 3685 aa33.41■■■□□ 2.94
LDB1-204ENST00000490751 SPECC1L-ADORA2AF8WAN1 911 aa33.41■■■□□ 2.94
LDB1-204ENST00000490751 USP46P62068 366 aa33.41■■■□□ 2.94
LDB1-204ENST00000490751 ZCWPW2Q504Y3 356 aa33.41■■■□□ 2.94
LDB1-204ENST00000490751 C1orf228Q6PIY5 440 aa33.41■■■□□ 2.94
LDB1-204ENST00000490751 INTS8Q75QN2 995 aaKnown RBP33.41■■■□□ 2.94
LDB1-204ENST00000490751 ENGASEQ8NFI3 743 aa33.41■■■□□ 2.94
LDB1-204ENST00000490751 C8orf48Q96LL4 319 aa33.41■■■□□ 2.94
LDB1-204ENST00000490751 B3GNT5Q9BYG0 378 aa33.41■■■□□ 2.94
LDB1-204ENST00000490751 LMAN1LQ9HAT1 526 aa33.41■■■□□ 2.94
LDB1-204ENST00000490751 FBXO4Q9UKT5 387 aa33.41■■■□□ 2.94
LDB1-204ENST00000490751 VPS13AQ96RL7 3174 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 CLDN5O00501 218 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 TRIM49P0CI25 452 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 TRIM49CP0CI26 452 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 KRT13P13646 458 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 P4HA1P13674 534 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 CTHP32929 405 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 PIK3CAP42336 1068 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 CACNA2D1P54289 1103 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 ADAM9Q13443 819 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 ZNF268Q14587 947 aaPredicted RBP33.4■■■□□ 2.94
LDB1-204ENST00000490751 RALGPS2Q86X27 583 aaPredicted RBP33.4■■■□□ 2.94
LDB1-204ENST00000490751 RIN3Q8TB24 985 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 TAF4BQ92750 862 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 SLC22A12Q96S37 553 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 CHRDQ9H2X0 955 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 GKN1Q9NS71 199 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 TMEM30AQ9NV96 361 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 RMND1Q9NWS8 449 aa33.4■■■□□ 2.94
LDB1-204ENST00000490751 TRAV19A0A0A6YYK7 116 aa33.39■■■□□ 2.94
LDB1-204ENST00000490751 ASS1P00966 412 aaKnown RBP33.39■■■□□ 2.94
LDB1-204ENST00000490751 HLA-DRAP01903 254 aa33.39■■■□□ 2.94
LDB1-204ENST00000490751 CKMP06732 381 aa33.39■■■□□ 2.94
LDB1-204ENST00000490751 PSMC2P35998 433 aaKnown RBP33.39■■■□□ 2.94
LDB1-204ENST00000490751 FAM160A1Q05DH4 1040 aa33.39■■■□□ 2.94
LDB1-204ENST00000490751 MTAPQ13126 283 aa33.39■■■□□ 2.94
LDB1-204ENST00000490751 SPOPLQ6IQ16 392 aa33.39■■■□□ 2.94
LDB1-204ENST00000490751 TXNDC11Q6PKC3 985 aa33.39■■■□□ 2.94
LDB1-204ENST00000490751 CYP2S1Q96SQ9 504 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms