RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 LRRTM3Q86VH5 581 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 MRPL43Q8N983 215 aaKnown RBP14.01□□□□□ -0.17
SNX12-205ENST00000490561 ZNF461Q8TAF7 563 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 MICAL1Q8TDZ2 1067 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 IPO4Q8TEX9 1081 aaKnown RBP14.01□□□□□ -0.17
SNX12-205ENST00000490561 ARNTL2Q8WYA1 636 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 PPP2R3CQ969Q6 453 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 VCPIP1Q96JH7 1222 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 HSFY1Q96LI6 401 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 TMEM209Q96SK2 561 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 PCDHB18PQ96TA0 734 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 KCNF1Q9H3M0 494 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 DMAP1Q9NPF5 467 aaPredicted RBP14.01□□□□□ -0.17
SNX12-205ENST00000490561 DPP7Q9UHL4 492 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 NAGPAQ9UK23 515 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 INTUQ9ULD6 942 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 STRIP2Q9ULQ0 834 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 NENFQ9UMX5 172 aa14.01□□□□□ -0.17
SNX12-205ENST00000490561 MTMR11A4FU01 709 aa14□□□□□ -0.17
SNX12-205ENST00000490561 C2orf71A6NGG8 1288 aa14□□□□□ -0.17
SNX12-205ENST00000490561 TEX28O15482 410 aa14□□□□□ -0.17
SNX12-205ENST00000490561 CALCAP01258 141 aa14□□□□□ -0.17
SNX12-205ENST00000490561 CALB1P05937 261 aa14□□□□□ -0.17
SNX12-205ENST00000490561 CCDC175P0C221 793 aa14□□□□□ -0.17
SNX12-205ENST00000490561 OR4Q2P0C623 313 aa14□□□□□ -0.17
SNX12-205ENST00000490561 UNGP13051 313 aaPredicted RBP14□□□□□ -0.17
SNX12-205ENST00000490561 ELF1P32519 619 aa14□□□□□ -0.17
SNX12-205ENST00000490561 DEKP35659 375 aaKnown RBP14□□□□□ -0.17
SNX12-205ENST00000490561 GPD2P43304 727 aa14□□□□□ -0.17
SNX12-205ENST00000490561 PLA2G4AP47712 749 aa14□□□□□ -0.17
SNX12-205ENST00000490561 ERVFC1P60507 584 aa14□□□□□ -0.17
SNX12-205ENST00000490561 RPL10AP62906 217 aaKnown RBP14□□□□□ -0.17
SNX12-205ENST00000490561 GFPT1Q06210 699 aaPredicted RBP14□□□□□ -0.17
SNX12-205ENST00000490561 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
SNX12-205ENST00000490561 PLD1Q13393 1074 aa14□□□□□ -0.17
SNX12-205ENST00000490561 NAA35Q5VZE5 725 aa14□□□□□ -0.17
SNX12-205ENST00000490561 PLPP4Q5VZY2 271 aa14□□□□□ -0.17
SNX12-205ENST00000490561 PAQR9Q6ZVX9 377 aa14□□□□□ -0.17
SNX12-205ENST00000490561 TTC30AQ86WT1 665 aa14□□□□□ -0.17
SNX12-205ENST00000490561 PHF13Q86YI8 300 aaPredicted RBP14□□□□□ -0.17
SNX12-205ENST00000490561 PASD1Q8IV76 773 aa14□□□□□ -0.17
SNX12-205ENST00000490561 C1orf131Q8NDD1 294 aaKnown RBP14□□□□□ -0.17
SNX12-205ENST00000490561 OLIG1Q8TAK6 271 aa14□□□□□ -0.17
SNX12-205ENST00000490561 SECISBP2LQ93073 1101 aaKnown RBP14□□□□□ -0.17
SNX12-205ENST00000490561 C8orf48Q96LL4 319 aa14□□□□□ -0.17
SNX12-205ENST00000490561 KLHL5Q96PQ7 755 aa14□□□□□ -0.17
SNX12-205ENST00000490561 LPIN3Q9BQK8 851 aa14□□□□□ -0.17
SNX12-205ENST00000490561 ISCUQ9H1K1 167 aa14□□□□□ -0.17
SNX12-205ENST00000490561 CSNK1G1Q9HCP0 422 aa14□□□□□ -0.17
SNX12-205ENST00000490561 TMLHEQ9NVH6 421 aa14□□□□□ -0.17
SNX12-205ENST00000490561 ABI2Q9NYB9 513 aaPredicted RBP14□□□□□ -0.17
SNX12-205ENST00000490561 PDE4DIPQ5VU43 2346 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 WDR27A2RRH5 827 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 ANKRD62A6NC57 917 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 CLDN5O00501 218 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 ZSCAN12O43309 604 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 CNPP09543 421 aaKnown RBP13.99□□□□□ -0.17
SNX12-205ENST00000490561 H2AFZP0C0S5 128 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 ATF2P15336 505 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 RPL17P18621 184 aaKnown RBP13.99□□□□□ -0.17
SNX12-205ENST00000490561 BDNFP23560 247 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 DNAJB1P25685 340 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 KLRC2P26717 231 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 MAGEA1P43355 309 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 PDE4CQ08493 712 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 PDCLQ13371 301 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 LIN9Q5TKA1 542 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 RSPO2Q6UXX9 243 aaPredicted RBP13.99□□□□□ -0.17
SNX12-205ENST00000490561 RNF19BQ6ZMZ0 732 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 CLEC20AQ6ZU45 233 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 H2AFVQ71UI9 128 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 ERICH1Q86X53 443 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 ZDHHC17Q8IUH5 632 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 UBA3Q8TBC4 463 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 HDAC7Q8WUI4 952 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 SLC35F5Q8WV83 523 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 AUTS2Q8WXX7 1259 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 KCTD13Q8WZ19 329 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 PPP1R13BQ96KQ4 1090 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 CDCA3Q99618 268 aaPredicted RBP13.99□□□□□ -0.17
SNX12-205ENST00000490561 SYNCQ9H7C4 482 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 SPTLC3Q9NUV7 552 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 COMMD8Q9NX08 183 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 EHD2Q9NZN4 543 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 WDR35Q9P2L0 1181 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 COLQQ9Y215 455 aaPredicted RBP13.99□□□□□ -0.17
SNX12-205ENST00000490561 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.99□□□□□ -0.17
SNX12-205ENST00000490561 PLXNA4Q9HCM2 1894 aa13.99□□□□□ -0.17
SNX12-205ENST00000490561 ADAM12O43184 909 aa13.98□□□□□ -0.17
SNX12-205ENST00000490561 SART1O43290 800 aaKnown RBP13.98□□□□□ -0.17
SNX12-205ENST00000490561 FBXO21O94952 628 aa13.98□□□□□ -0.17
SNX12-205ENST00000490561 GLUD1P00367 558 aa13.98□□□□□ -0.17
SNX12-205ENST00000490561 FTLP02792 175 aaPredicted RBP13.98□□□□□ -0.17
SNX12-205ENST00000490561 CFHP08603 1231 aa13.98□□□□□ -0.17
SNX12-205ENST00000490561 HAPLN1P10915 354 aaPredicted RBP13.98□□□□□ -0.17
SNX12-205ENST00000490561 MMP8P22894 467 aa13.98□□□□□ -0.17
SNX12-205ENST00000490561 GRIK1P39086 918 aa13.98□□□□□ -0.17
SNX12-205ENST00000490561 RPL34P49207 117 aaKnown RBP13.98□□□□□ -0.17
SNX12-205ENST00000490561 VAV2P52735 878 aa13.98□□□□□ -0.17
SNX12-205ENST00000490561 MAP3K7CLP57077 242 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms