RNA–Protein interactions for RNA: ENST00000490540.1

ASIC3-208, Transcript of acid sensing ion channel subunit 3, human

TSL 2

Gene ASIC3, Length 520 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ASIC3-208	ENST00000490540	WARS	P23381	471 aa	Known RBP	12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	SNRPF	P62306	86 aa	Known RBP	12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	RPL10A	P62906	217 aa	Known RBP	12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	SATB1	Q01826	763 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	CYP27A1	Q02318	531 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	ST3GAL2	Q16842	350 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	CFAP221	Q4G0U5	840 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	MDH1B	Q5I0G3	518 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	PPM1J	Q5JR12	505 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	FAM171B	Q6P995	826 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	DPH6	Q7L8W6	267 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	CMTM8	Q8IZV2	173 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	CELF5	Q8N6W0	485 aa	Known RBP	12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	TTC16	Q8NEE8	873 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	SPATA18	Q8TC71	538 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	USP13	Q92995	863 aa	Predicted RBP	12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	GOLPH3L	Q9H4A5	285 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	DPEP3	Q9H4B8	488 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	TRPC7	Q9HCX4	862 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	NXF1	Q9UBU9	619 aa	Known RBP	12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	CDH9	Q9ULB4	789 aa		12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	TPR	P12270	2363 aa	Known RBP	12.82	□□□□□ -0.36
ASIC3-208	ENST00000490540	LRRIQ3	A6PVS8	624 aa	Predicted RBP	12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	CHURC1-FNTB	B4DL54	471 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	SPECC1L-ADORA2A	F8WAN1	911 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	PHACTR2	O75167	634 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	CLSTN1	O94985	981 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	RPN1	P04843	607 aa	Known RBP	12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	BDNF	P23560	247 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	AVPR1A	P37288	418 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	SYK	P43405	635 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	RAP1GAP	P47736	663 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	CXCL12	P48061	93 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	FNTB	P49356	437 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	CCR3	P51677	355 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	TNNC1	P63316	161 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	DLG4	P78352	724 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	DMWD	Q09019	674 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	SRSF5	Q13243	272 aa	Known RBP	12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	BIRC3	Q13489	604 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	TRPC3	Q13507	836 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	SIM2	Q14190	667 aa	Predicted RBP	12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	WDR72	Q3MJ13	1102 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	ARHGAP29	Q52LW3	1261 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	TDRD10	Q5VZ19	366 aa	Known RBP	12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	TRIM68	Q6AZZ1	485 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	FSIP1	Q8NA03	581 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	OR6B3	Q8NGW1	331 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	NETO1	Q8TDF5	533 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	MRPS31	Q92665	395 aa	Known RBP	12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	PCED1B	Q96HM7	432 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	SLC22A12	Q96S37	553 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	XYLT2	Q9H1B5	865 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	SNX25	Q9H3E2	840 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	KCTD10	Q9H3F6	313 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	SMYD3	Q9H7B4	428 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	SEMA4G	Q9NTN9	838 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	OBP2A	Q9NY56	170 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	CGN	Q9P2M7	1197 aa	Known RBP	12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	ACACB	O00763	2458 aa		12.81	□□□□□ -0.36
ASIC3-208	ENST00000490540	TICRR	Q7Z2Z1	1910 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	KMT2B	Q9UMN6	2715 aa	Predicted RBP	12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	SLC30A4	O14863	429 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	NR3C1	P04150	777 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	RET	P07949	1114 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	CHRNB1	P11230	501 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	WEE1	P30291	646 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	CTH	P32929	405 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	GNL1	P36915	607 aa	Predicted RBP	12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	CACNA2D1	P54289	1103 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	CDH8	P55286	799 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	USP46	P62068	366 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	GAS6	Q14393	721 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	PON2	Q15165	354 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	HEATR6	Q6AI08	1181 aa	Known RBP	12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	SCARA5	Q6ZMJ2	495 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	C4orf50	Q6ZRC1	276 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540		Q6ZS52	159 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	MON1A	Q86VX9	555 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	GOLGA5	Q8TBA6	731 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	PARD3B	Q8TEW8	1205 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	TRMT2B	Q96GJ1	504 aa	Known RBP	12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	FUBP3	Q96I24	572 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	CYP2S1	Q96SQ9	504 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	HPS4	Q9NQG7	708 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	GKN1	Q9NS71	199 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	TMEM30A	Q9NV96	361 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	DMAC2	Q9NW81	257 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	MAGEC2	Q9UBF1	373 aa	Predicted RBP	12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	USP25	Q9UHP3	1055 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	MAPK8IP1	Q9UQF2	711 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	TCHH	Q07283	1943 aa		12.8	□□□□□ -0.36
ASIC3-208	ENST00000490540	FAM237A	A0A1B0GTK4	181 aa		12.79	□□□□□ -0.36
ASIC3-208	ENST00000490540	C2orf78	A6NCI8	922 aa		12.79	□□□□□ -0.36
ASIC3-208	ENST00000490540	OTOL1	A6NHN0	477 aa	Predicted RBP	12.79	□□□□□ -0.36
ASIC3-208	ENST00000490540	CLDN5	O00501	218 aa		12.79	□□□□□ -0.36
ASIC3-208	ENST00000490540	HR	O43593	1189 aa		12.79	□□□□□ -0.36
ASIC3-208	ENST00000490540	GDF9	O60383	454 aa		12.79	□□□□□ -0.36
ASIC3-208	ENST00000490540	TACC1	O75410	805 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms