RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 FAM136AQ96C01 138 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 SELENOOQ9BVL4 669 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 TPSD1Q9BZJ3 242 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 AMBRA1Q9C0C7 1298 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 SERHL2Q9H4I8 314 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 CXorf36Q9H7Y0 433 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 MMRN2Q9H8L6 949 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 GJB4Q9NTQ9 266 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 SERTAD3Q9UJW9 196 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 MYRFQ9Y2G1 1151 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 MRPS17Q9Y2R5 130 aaKnown RBP4.73□□□□□ -1.65
CD46-216ENST00000490278 CEP83Q9Y592 693 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 CDY1Q9Y6F8 540 aa4.73□□□□□ -1.65
CD46-216ENST00000490278 MYL4P12829 197 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 INSRRP14616 1297 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 PPP3CBP16298 524 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 TPH1P17752 444 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 KCNA3P22001 575 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 PPM1AP35813 382 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 PTDSS1P48651 473 aaKnown RBP4.72□□□□□ -1.65
CD46-216ENST00000490278 BLOC1S1P78537 153 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 ITIH3Q06033 890 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 SF3B3Q15393 1217 aaKnown RBP4.72□□□□□ -1.65
CD46-216ENST00000490278 SLC35G1Q2M3R5 365 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 CACHD1Q5VU97 1274 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 FCRL6Q6DN72 434 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 PPP2R3CQ969Q6 453 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 ZNF566Q969W8 418 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 LRRC46Q96FV0 321 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 EIF2AQ9BY44 585 aaKnown RBP4.72□□□□□ -1.65
CD46-216ENST00000490278 ACTRT3Q9BYD9 372 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 WDR11Q9BZH6 1224 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 CASS4Q9NQ75 786 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 DNMT3BQ9UBC3 853 aaKnown RBP4.72□□□□□ -1.65
CD46-216ENST00000490278 SSX2IPQ9Y2D8 614 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 LRCH1Q9Y2L9 728 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 PCDHGB2Q9Y5G2 931 aa4.72□□□□□ -1.65
CD46-216ENST00000490278 AQP7P3A6NL99 342 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 NPIPB8E9PQR5 432 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 PROM1O43490 865 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 NARSO43776 548 aaKnown RBP4.71□□□□□ -1.66
CD46-216ENST00000490278 RRP9O43818 475 aaKnown RBP4.71□□□□□ -1.66
CD46-216ENST00000490278 RASAL1O95294 804 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 EEF1GP26641 437 aaKnown RBP4.71□□□□□ -1.66
CD46-216ENST00000490278 ZEB1P37275 1124 aaPredicted RBP4.71□□□□□ -1.66
CD46-216ENST00000490278 HSPA7P48741 367 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 HNRNPMP52272 730 aaKnown RBP eCLIP4.71□□□□□ -1.661e-7■■■■■ 27.7
CD46-216ENST00000490278 ITGA8P53708 1063 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 MAPK10P53779 464 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 NXPH1P58417 271 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 KRTAP10-2P60368 255 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 MPEG1Q2M385 716 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 C10orf62Q5T681 223 aaPredicted RBP4.71□□□□□ -1.66
CD46-216ENST00000490278 PLAG1Q6DJT9 500 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 VWA1Q6PCB0 445 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 KRT28Q7Z3Y7 464 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 KCTD20Q7Z5Y7 419 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 SPARTQ8N0X7 666 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 LCORLQ8N3X6 602 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 CCDC150Q8NCX0 1101 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 VPS37AQ8NEZ2 397 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 LPIN2Q92539 896 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 AIFM2Q9BRQ8 373 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 MAGEB5Q9BZ81 275 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 FAM83DQ9H4H8 585 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 HEYLQ9NQ87 328 aaPredicted RBP4.71□□□□□ -1.66
CD46-216ENST00000490278 TRMT13Q9NUP7 481 aaKnown RBP4.71□□□□□ -1.66
CD46-216ENST00000490278 KCTD5Q9NXV2 234 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 DKK4Q9UBT3 224 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 CAPN11Q9UMQ6 739 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 MAN2B2Q9Y2E5 1009 aa4.71□□□□□ -1.66
CD46-216ENST00000490278 MATN3O15232 486 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 PPM1DO15297 605 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 RGS10O43665 173 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 SRGAP2O75044 1071 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 PIAS2O75928 621 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 ZNF202O95125 648 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 CSF1RP07333 972 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 TECP42680 631 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 PDE6CP51160 858 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 COPAP53621 1224 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 CHAF1AQ13111 956 aaPredicted RBP4.7□□□□□ -1.66
CD46-216ENST00000490278 STK3Q13188 491 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 ZXDCQ2QGD7 858 aaPredicted RBP4.7□□□□□ -1.66
CD46-216ENST00000490278 ZNF750Q32MQ0 723 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 PTCHD3Q3KNS1 767 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 DBX2Q6ZNG2 339 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 TSHZ1Q6ZSZ6 1077 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 SYTL1Q8IYJ3 562 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 ENAHQ8N8S7 591 aaPredicted RBP4.7□□□□□ -1.66
CD46-216ENST00000490278 TOR1AIP2Q8NFQ8 470 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 MYCBPAPQ8TBZ2 947 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 PGBD1Q96JS3 809 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 Q96MF0 132 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 PSMD1Q99460 953 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 ARPC5LQ9BPX5 153 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 TRIM5Q9C035 493 aa4.7□□□□□ -1.66
CD46-216ENST00000490278 WDR12Q9GZL7 423 aaKnown RBP4.7□□□□□ -1.66
CD46-216ENST00000490278 GBA2Q9HCG7 927 aaPredicted RBP4.7□□□□□ -1.66
CD46-216ENST00000490278 CDC23Q9UJX2 597 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms