RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 ARNTLO00327 626 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 CHADO15335 359 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 HLA-DRAP01903 254 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 P4HA1P13674 534 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 GLULP15104 373 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 PTPN1P18031 435 aaKnown RBP21.06■□□□□ 0.96
SMC4-222ENST00000490207 TARSP26639 723 aaKnown RBP21.06■□□□□ 0.96
SMC4-222ENST00000490207 AVPR1AP37288 418 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 CDH8P55286 799 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 ENPEPQ07075 957 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 SGSM1Q2NKQ1 1148 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 ZNF852Q6ZMS4 543 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 B3GALNT2Q8NCR0 500 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 BPIFB1Q8TDL5 484 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 CSGALNACT1Q8TDX6 532 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 TAF4BQ92750 862 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 ERCC4Q92889 916 aaPredicted RBP21.06■□□□□ 0.96
SMC4-222ENST00000490207 SPATA17Q96L03 361 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 OSBPL6Q9BZF3 934 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 SMG9Q9H0W8 520 aaKnown RBP21.06■□□□□ 0.96
SMC4-222ENST00000490207 MTF2Q9Y483 593 aaPredicted RBP21.06■□□□□ 0.96
SMC4-222ENST00000490207 PIAS3Q9Y6X2 628 aa21.06■□□□□ 0.96
SMC4-222ENST00000490207 CACNA1HO95180 2353 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 FAM170BA6NMN3 283 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 PRCPP42785 496 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 ARHGAP29Q52LW3 1261 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 COBLL1Q53SF7 1204 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 TXNDC8Q6A555 127 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 CELF5Q8N6W0 485 aaKnown RBP21.05■□□□□ 0.96
SMC4-222ENST00000490207 SPATA20Q8TB22 786 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 CEP295NLQ96MC4 621 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 LRRC3BQ96PB8 259 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 TSG101Q99816 390 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 BCO2Q9BYV7 579 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 ELOVL4Q9GZR5 314 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 SDCBP2Q9H190 292 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 MMRN2Q9H8L6 949 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 MRPS17Q9Y2R5 130 aaKnown RBP21.05■□□□□ 0.96
SMC4-222ENST00000490207 PCDHA5Q9Y5H7 936 aa21.05■□□□□ 0.96
SMC4-222ENST00000490207 SHISA7A6NL88 538 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 SOBPA7XYQ1 873 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 MAN2B1O00754 1011 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 KINO60870 393 aaKnown RBP21.04■□□□□ 0.96
SMC4-222ENST00000490207 ASS1P00966 412 aaKnown RBP21.04■□□□□ 0.96
SMC4-222ENST00000490207 EPB41P11171 864 aaKnown RBP21.04■□□□□ 0.96
SMC4-222ENST00000490207 MAGEA9P43362 315 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 GCLMP48507 274 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 PPP3CAQ08209 521 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 SPOPLQ6IQ16 392 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 DENND5BQ6ZUT9 1274 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 MON1AQ86VX9 555 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 ZFYVE19Q96K21 471 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 NELL2Q99435 816 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 IMPG2Q9BZV3 1241 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 ZNF518BQ9C0D4 1074 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 KIF9Q9HAQ2 790 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 TRPC7Q9HCX4 862 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 ATP8B3O60423 1300 aa21.04■□□□□ 0.96
SMC4-222ENST00000490207 F8VP50 259 aa21.03■□□□□ 0.96
SMC4-222ENST00000490207 CETN3O15182 167 aa21.03■□□□□ 0.96
SMC4-222ENST00000490207 NCAM2O15394 837 aa21.03■□□□□ 0.96
SMC4-222ENST00000490207 ASPAP45381 313 aa21.03■□□□□ 0.96
SMC4-222ENST00000490207 PLCB2Q00722 1185 aa21.03■□□□□ 0.96
SMC4-222ENST00000490207 USP13Q92995 863 aaPredicted RBP21.03■□□□□ 0.96
SMC4-222ENST00000490207 MSANTD3Q96H12 275 aa21.03■□□□□ 0.96
SMC4-222ENST00000490207 TNIP3Q96KP6 325 aa21.03■□□□□ 0.96
SMC4-222ENST00000490207 C8orf48Q96LL4 319 aa21.03■□□□□ 0.96
SMC4-222ENST00000490207 B3GNT5Q9BYG0 378 aa21.03■□□□□ 0.96
SMC4-222ENST00000490207 GTPBP4Q9BZE4 634 aaKnown RBP21.03■□□□□ 0.96
SMC4-222ENST00000490207 TMEM8AQ9HCN3 771 aa21.03■□□□□ 0.96
SMC4-222ENST00000490207 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.03■□□□□ 0.964e-6■■■■□ 21.2
SMC4-222ENST00000490207 NDRG2Q9UN36 371 aaKnown RBP21.03■□□□□ 0.96
SMC4-222ENST00000490207 CCL26Q9Y258 94 aa21.03■□□□□ 0.96
SMC4-222ENST00000490207 MYH10P35580 1976 aa21.03■□□□□ 0.96
SMC4-222ENST00000490207 CLDN5O00501 218 aa21.02■□□□□ 0.96
SMC4-222ENST00000490207 KPNA1P52294 538 aaPredicted RBP21.02■□□□□ 0.96
SMC4-222ENST00000490207 CACNA2D1P54289 1103 aa21.02■□□□□ 0.96
SMC4-222ENST00000490207 NOP14P78316 857 aaKnown RBP21.02■□□□□ 0.96
SMC4-222ENST00000490207 ZNF268Q14587 947 aaPredicted RBP21.02■□□□□ 0.96
SMC4-222ENST00000490207 FAM35AQ86V20 835 aa21.02■□□□□ 0.96
SMC4-222ENST00000490207 C1orf210Q8IVY1 113 aa21.02■□□□□ 0.96
SMC4-222ENST00000490207 ELOA2Q8IYF1 753 aaPredicted RBP21.02■□□□□ 0.96
SMC4-222ENST00000490207 TAS1R2Q8TE23 839 aa21.02■□□□□ 0.96
SMC4-222ENST00000490207 FAM3CQ92520 227 aa21.02■□□□□ 0.96
SMC4-222ENST00000490207 EEF2KMTQ96G04 330 aa21.02■□□□□ 0.96
SMC4-222ENST00000490207 MED10Q9BTT4 135 aa21.02■□□□□ 0.96
SMC4-222ENST00000490207 TDP1Q9NUW8 608 aa21.02■□□□□ 0.96
SMC4-222ENST00000490207 THG1LQ9NWX6 298 aaKnown RBP21.02■□□□□ 0.96
SMC4-222ENST00000490207 EHD2Q9NZN4 543 aa21.02■□□□□ 0.96
SMC4-222ENST00000490207 MYO16Q9Y6X6 1858 aa21.01■□□□□ 0.95
SMC4-222ENST00000490207 TRAV19A0A0A6YYK7 116 aa21.01■□□□□ 0.95
SMC4-222ENST00000490207 GADD45BO75293 160 aaPredicted RBP21.01■□□□□ 0.95
SMC4-222ENST00000490207 CKMP06732 381 aa21.01■□□□□ 0.95
SMC4-222ENST00000490207 NBL1P41271 181 aa21.01■□□□□ 0.95
SMC4-222ENST00000490207 MLLT6P55198 1093 aaPredicted RBP21.01■□□□□ 0.95
SMC4-222ENST00000490207 USP46P62068 366 aa21.01■□□□□ 0.95
SMC4-222ENST00000490207 CCDC150Q8NCX0 1101 aa21.01■□□□□ 0.95
SMC4-222ENST00000490207 CLDN23Q96B33 292 aa21.01■□□□□ 0.95
SMC4-222ENST00000490207 TTLL2Q9BWV7 592 aa21.01■□□□□ 0.95
SMC4-222ENST00000490207 C8orf33Q9H7E9 229 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms