RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 LAMTOR5O43504 91 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 PAPSS2O95340 614 aaPredicted RBP10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 LMNAP02545 664 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 DLATP10515 647 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 TCF3P15923 654 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 PFKLP17858 780 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 TNNI1P19237 187 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 CCNE1P24864 410 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 HOXA6P31267 233 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 CTHP32929 405 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 GNL1P36915 607 aaPredicted RBP10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 AP3M2P53677 418 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 KRT85P78386 507 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 NFIL3Q16649 462 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 SDHAF4Q5VUM1 108 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 ZC3H14Q6PJT7 736 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 TXNDC11Q6PKC3 985 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 GPIHBP1Q8IV16 184 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 YAF2Q8IY57 180 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 ADSSL1Q8N142 457 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 KIAA1958Q8N8K9 716 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 RIN3Q8TB24 985 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 MYCBPAPQ8TBZ2 947 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 PCED1BQ96HM7 432 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 SPATA32Q96LK8 384 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 FNBP1Q96RU3 617 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 SYT15Q9BQS2 421 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 MRPL45Q9BRJ2 306 aaKnown RBP10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 TTLL2Q9BWV7 592 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 LMAN1LQ9HAT1 526 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 GKN1Q9NS71 199 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 TDP1Q9NUW8 608 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 ZSCAN32Q9NX65 697 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 UXTQ9UBK9 157 aaPredicted RBP10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 TRAF3IP3Q9Y228 551 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 CCL26Q9Y258 94 aa10.4□□□□□ -0.74
TMEM39A-210ENST00000490099 NUP210Q8TEM1 1887 aaPredicted RBP10.4□□□□□ -0.75
TMEM39A-210ENST00000490099 KIF26AQ9ULI4 1882 aaPredicted RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 OTOL1A6NHN0 477 aaPredicted RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 IKBKBO14920 756 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 MAPK13O15264 365 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 EXOC3O60645 756 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 RHOBTB3O94955 611 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 RPN1P04843 607 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 NDUFA8P51970 172 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 MYL6P60660 151 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 NOP14P78316 857 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 ENPEPQ07075 957 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 DPYDQ12882 1025 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 CCINQ13939 588 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 BECN1Q14457 450 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 WDR72Q3MJ13 1102 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 DGKKQ5KSL6 1271 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 C1orf220Q5T0J3 134 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 TDRD10Q5VZ19 366 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 TXNDC8Q6A555 127 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 C4orf50Q6ZRC1 276 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 SPATA2LQ8IUW3 424 aaPredicted RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 SYNPOQ8N3V7 929 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 SPEM1Q8N4L4 309 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 MAB21L3Q8N8X9 362 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 TMC2Q8TDI7 906 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 CSGALNACT1Q8TDX6 532 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 NOC3LQ8WTT2 800 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 MRPS31Q92665 395 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 MYLPFQ96A32 169 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 SYAP1Q96A49 352 aaPredicted RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 ZFYVE19Q96K21 471 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 C8orf48Q96LL4 319 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 GCNAQ96QF7 691 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 SLC22A12Q96S37 553 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 SCAND2PQ9GZW5 306 aaPredicted RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 SMG9Q9H0W8 520 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 KIF9Q9HAQ2 790 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 HPS4Q9NQG7 708 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 TMEM30AQ9NV96 361 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 THG1LQ9NWX6 298 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 GTSE1Q9NYZ3 720 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 IL37Q9NZH6 218 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 MAGEC2Q9UBF1 373 aaPredicted RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 NDRG2Q9UN36 371 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 R3HCC1Q9Y3T6 440 aaKnown RBP10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 PATJQ8NI35 1801 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 TICRRQ7Z2Z1 1910 aa10.39□□□□□ -0.75
TMEM39A-210ENST00000490099 MYO15AQ9UKN7 3530 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 CEP250Q9BV73 2442 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 LRRIQ3A6PVS8 624 aaPredicted RBP10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 DPYSL4O14531 572 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 TRDMT1O14717 391 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 VNN1O95497 513 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 OLFM2O95897 454 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 NR3C1P04150 777 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 PDGFRBP09619 1106 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 PTPN1P18031 435 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 BDNFP23560 247 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 SYKP43405 635 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 SOX9P48436 509 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 CASP4P49662 377 aa10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 PSMC1P62191 440 aaKnown RBP10.38□□□□□ -0.75
TMEM39A-210ENST00000490099 CSTF1Q05048 431 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms