RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 TGM2P21980 687 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 C1DQ13901 141 aaKnown RBP9.18□□□□□ -0.94
LSAMP-205ENST00000490035 ACBD5Q5T8D3 534 aaPredicted RBP9.18□□□□□ -0.94
LSAMP-205ENST00000490035 TAF2Q6P1X5 1199 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 KSR1Q8IVT5 923 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 C17orf80Q9BSJ5 609 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 LRRC40Q9H9A6 602 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 ZFYVE28Q9HCC9 887 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 RGL1Q9NZL6 768 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 GPR182O15218 404 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 LZTS3O60299 673 aaPredicted RBP9.18□□□□□ -0.94
LSAMP-205ENST00000490035 KRT75O95678 551 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 LHX1P48742 406 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 BCAT1P54687 386 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 C11orf63Q6NUN7 778 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 ST13P5Q8NFI4 369 aaPredicted RBP9.18□□□□□ -0.94
LSAMP-205ENST00000490035 WDR24Q96S15 920 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 CNOT7Q9UIV1 285 aaKnown RBP9.18□□□□□ -0.94
LSAMP-205ENST00000490035 MPOP05164 745 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 CUL2Q13617 745 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 TRMT5Q32P41 509 aaKnown RBP9.18□□□□□ -0.94
LSAMP-205ENST00000490035 EPHA10Q5JZY3 1008 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 IL31Q6EBC2 164 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 DDX42Q86XP3 938 aaKnown RBP eCLIP9.18□□□□□ -0.94
LSAMP-205ENST00000490035 TC2NQ8N9U0 490 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 RAET1EQ8TD07 263 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 MAGEB10Q96LZ2 347 aaPredicted RBP9.18□□□□□ -0.94
LSAMP-205ENST00000490035 COLEC11Q9BWP8 271 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 WDCPQ9H6R7 721 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 PRR12Q9ULL5 1215 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 MYH8P13535 1937 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 SUPT3HB4E1H0 165 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 ZNF34Q8IZ26 560 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 CELF1Q92879 486 aaKnown RBP9.18□□□□□ -0.94
LSAMP-205ENST00000490035 CHP1Q99653 195 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 SNX9Q9Y5X1 595 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 NCK2O43639 380 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 GYPCP04921 128 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 DCAF6Q58WW2 860 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 ATG9AQ7Z3C6 839 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 TMEM117Q9H0C3 514 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 CAB39Q9Y376 341 aaPredicted RBP9.18□□□□□ -0.94
LSAMP-205ENST00000490035 CNTNAP5Q8WYK1 1306 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 PRAMEF22A3QJZ6 481 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 RPS6KA5O75582 802 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 HLA-DRAP01903 254 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 CYGBQ8WWM9 190 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 DNAJC7Q99615 494 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 PCDHB7Q9Y5E2 793 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 CNTNAP4Q9C0A0 1308 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 MYMKA6NI61 221 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 USP1O94782 785 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 NDUFB10O96000 172 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 VDRP11473 427 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 SKP1P63208 163 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 ZNF438Q7Z4V0 828 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 CNDP1Q96KN2 507 aa9.18□□□□□ -0.94
LSAMP-205ENST00000490035 KLHL41O60662 606 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 FKBP9O95302 570 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 COMTP21964 271 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 SERPINB3P29508 390 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 PRKCEQ02156 737 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 TRIP4Q15650 581 aaPredicted RBP9.17□□□□□ -0.94
LSAMP-205ENST00000490035 FKBP9P1Q75LS8 142 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 SLC13A5Q86YT5 568 aaPredicted RBP9.17□□□□□ -0.94
LSAMP-205ENST00000490035 TMC2Q8TDI7 906 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 ARL8AQ96BM9 186 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 MROH8Q9H579 483 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 KRT84Q9NSB2 600 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 NCKIPSDQ9NZQ3 722 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 ANKRD6Q9Y2G4 727 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 DTNAQ9Y4J8 743 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 JCADQ9P266 1359 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 HEATR9A2RTY3 570 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 NPTXRO95502 500 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 CYP2C9P11712 490 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 IMPDH2P12268 514 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 GRK3P35626 688 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 CAVIN3Q969G5 261 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 ERP27Q96DN0 273 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 CCT7Q99832 543 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 FHOD1Q9Y613 1164 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 PRRG1O14668 218 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 ICAM1P05362 532 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 AKR1B1P15121 316 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 HK2P52789 917 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 TRIM71Q2Q1W2 868 aaKnown RBP9.17□□□□□ -0.94
LSAMP-205ENST00000490035 KRT78Q8N1N4 520 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 PHACTR1Q9C0D0 580 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 CPS1P31327 1500 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 FER1L4A9Z1Z3 1794 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 A0A087WWV3 80 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 UBXN8O00124 270 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 VPS26AO75436 327 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 ARL4DP49703 201 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 IRAK1P51617 712 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 CORO7P57737 925 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 PLD1Q13393 1074 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 ARID5BQ14865 1188 aa9.17□□□□□ -0.94
LSAMP-205ENST00000490035 PCBP1Q15365 356 aaKnown RBP eCLIP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms