RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 POU5F1Q01860 360 aaKnown RBP15□□□□□ -0.01
VARS-227ENST00000489979 CCDC142Q17RM4 750 aa15□□□□□ -0.01
VARS-227ENST00000489979 INTS6LQ5JSJ4 861 aaKnown RBP15□□□□□ -0.01
VARS-227ENST00000489979 ARL6IP4Q66PJ3 421 aaKnown RBP15□□□□□ -0.01
VARS-227ENST00000489979 KIAA1211LQ6NV74 962 aa15□□□□□ -0.01
VARS-227ENST00000489979 TTC30AQ86WT1 665 aa15□□□□□ -0.01
VARS-227ENST00000489979 CCDC33Q8N5R6 958 aa15□□□□□ -0.01
VARS-227ENST00000489979 MDGA1Q8NFP4 955 aa15□□□□□ -0.01
VARS-227ENST00000489979 GTF3C4Q9UKN8 822 aa15□□□□□ -0.01
VARS-227ENST00000489979 L1RE1Q9UN81 338 aa15□□□□□ -0.01
VARS-227ENST00000489979 SRRM3A6NNA2 597 aaPredicted RBP14.99□□□□□ -0.01
VARS-227ENST00000489979 SLC26A4O43511 780 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 EIF5BO60841 1220 aaKnown RBP14.99□□□□□ -0.01
VARS-227ENST00000489979 IL18RAPO95256 599 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 NFATC1O95644 943 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 OPRD1P41143 372 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 UBA7P41226 1012 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 WNT7BP56706 349 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 OSTM1Q86WC4 334 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 NT5DC4Q86YG4 428 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 SCN4BQ8IWT1 228 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 FSIP1Q8NA03 581 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 POMGNT1Q8WZA1 660 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 RAD54LQ92698 747 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 AK8Q96MA6 479 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 PKMYT1Q99640 499 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 MMP17Q9ULZ9 603 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 AGAP1Q9UPQ3 857 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 CACNA1EQ15878 2313 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 PKD1L2Q7Z442 2459 aa14.99□□□□□ -0.01
VARS-227ENST00000489979 MYOFQ9NZM1 2061 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 HCRTO43612 131 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 HUS1O60921 280 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 ITGB3P05106 788 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 HNRNPLP14866 589 aaKnown RBP eCLIP14.98□□□□□ -0.01
VARS-227ENST00000489979 TCF3P15923 654 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 HDCP19113 662 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 PLCG1P19174 1290 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 ADSSP30520 456 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 TFAMQ00059 246 aaKnown RBP14.98□□□□□ -0.01
VARS-227ENST00000489979 KCNB1Q14721 858 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 CRY1Q16526 586 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 GAB4Q2WGN9 574 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 TRIM61Q5EBN2 209 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 SCARA3Q6AZY7 606 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 TMEM92Q6UXU6 159 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 SPATA2LQ8IUW3 424 aaPredicted RBP14.98□□□□□ -0.01
VARS-227ENST00000489979 TMEM86AQ8N2M4 240 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 C1orf127Q8N9H9 656 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 OLIG1Q8TAK6 271 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 RLN3Q8WXF3 142 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 ZCCHC14Q8WYQ9 949 aaKnown RBP14.98□□□□□ -0.01
VARS-227ENST00000489979 ST6GALNAC4Q9H4F1 302 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 EVLQ9UI08 416 aaPredicted RBP14.98□□□□□ -0.01
VARS-227ENST00000489979 CIZ1Q9ULV3 898 aaPredicted RBP14.98□□□□□ -0.01
VARS-227ENST00000489979 ARHGAP26Q9UNA1 814 aa14.98□□□□□ -0.01
VARS-227ENST00000489979 TNRC6BQ9UPQ9 1833 aaKnown RBP14.98□□□□□ -0.01
VARS-227ENST00000489979 FASNP49327 2511 aaKnown RBP14.97□□□□□ -0.01
VARS-227ENST00000489979 HYAL3O43820 417 aaPredicted RBP14.97□□□□□ -0.01
VARS-227ENST00000489979 MAPK8P45983 427 aa14.97□□□□□ -0.01
VARS-227ENST00000489979 ZXDBP98169 803 aa14.97□□□□□ -0.01
VARS-227ENST00000489979 LMAN2Q12907 356 aa14.97□□□□□ -0.01
VARS-227ENST00000489979 POSTNQ15063 836 aa14.97□□□□□ -0.01
VARS-227ENST00000489979 CFAP221Q4G0U5 840 aa14.97□□□□□ -0.01
VARS-227ENST00000489979 ARMCX6Q7L4S7 300 aa14.97□□□□□ -0.01
VARS-227ENST00000489979 ZSWIM2Q8NEG5 633 aa14.97□□□□□ -0.01
VARS-227ENST00000489979 RASSF8Q8NHQ8 419 aa14.97□□□□□ -0.01
VARS-227ENST00000489979 FAM84AQ96KN4 292 aa14.97□□□□□ -0.01
VARS-227ENST00000489979 FAM213AQ9BRX8 229 aa14.97□□□□□ -0.01
VARS-227ENST00000489979 NUSAP1Q9BXS6 441 aaKnown RBP14.97□□□□□ -0.01
VARS-227ENST00000489979 SNX9Q9Y5X1 595 aa14.97□□□□□ -0.01
VARS-227ENST00000489979 MYO18AQ92614 2054 aaKnown RBP14.96□□□□□ -0.01
VARS-227ENST00000489979 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 LEFTY2O00292 366 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 ALDH1A2O94788 518 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 LHX1P48742 406 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 MRPS21P82921 87 aaKnown RBP14.96□□□□□ -0.01
VARS-227ENST00000489979 GRIN1Q05586 938 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 LPCAT2Q7L5N7 544 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 ZNF720Q7Z2F6 126 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 SFR1Q86XK3 245 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 SFTPA1Q8IWL2 248 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 TMEFF1Q8IYR6 380 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 ADGRF2Q8IZF7 708 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 CSGALNACT2Q8N6G5 542 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 ALLCQ8N6M5 410 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 FRMD1Q8N878 549 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 TXNDC5Q8NBS9 432 aaKnown RBP14.96□□□□□ -0.01
VARS-227ENST00000489979 LARP4BQ92615 738 aaKnown RBP14.96□□□□□ -0.01
VARS-227ENST00000489979 FUBP3Q96I24 572 aaKnown RBP eCLIP14.96□□□□□ -0.01
VARS-227ENST00000489979 FNBP1Q96RU3 617 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 SLC32A1Q9H598 525 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 TMEM74BQ9NUR3 256 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 KIF3AQ9Y496 699 aa14.96□□□□□ -0.01
VARS-227ENST00000489979 ADAMTS9Q9P2N4 1935 aa14.96□□□□□ -0.02
VARS-227ENST00000489979 DMXL2Q8TDJ6 3036 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 SGK1O00141 431 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 TNFRSF10BO14763 440 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 MAP3K13O43283 966 aa14.95□□□□□ -0.02
VARS-227ENST00000489979 PPP1R37O75864 691 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms