RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 NKD2Q969F2 451 aaPredicted RBP12.65□□□□□ -0.38
SRSF4-204ENST00000489898 CCDC127Q96BQ5 260 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 ZNF518BQ9C0D4 1074 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 KIAA1586Q9HCI6 787 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 CGNQ9P2M7 1197 aaKnown RBP12.65□□□□□ -0.38
SRSF4-204ENST00000489898 CFAP45Q9UL16 551 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 TRAF3IP3Q9Y228 551 aa12.65□□□□□ -0.38
SRSF4-204ENST00000489898 TNFRSF10BO14763 440 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 PRPF40AO75400 957 aaKnown RBP12.64□□□□□ -0.39
SRSF4-204ENST00000489898 PAPSS2O95340 614 aaPredicted RBP12.64□□□□□ -0.39
SRSF4-204ENST00000489898 FGF19O95750 216 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 TNNC2P02585 160 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 TCF3P15923 654 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 TGM1P22735 817 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 CCNE1P24864 410 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 ASPAP45381 313 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 RAP1GAPP47736 663 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 LHX1P48742 406 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 PGFP49763 221 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 KRT85P78386 507 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 MYL7Q01449 175 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 SATB1Q01826 763 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 SURF1Q15526 300 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 ZNF852Q6ZMS4 543 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 KRBA2Q6ZNG9 492 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 MON1AQ86VX9 555 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 ZC3H3Q8IXZ2 948 aaKnown RBP12.64□□□□□ -0.39
SRSF4-204ENST00000489898 MAB21L3Q8N8X9 362 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 ENGASEQ8NFI3 743 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 MYCBPAPQ8TBZ2 947 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 BPIFB1Q8TDL5 484 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 ZFRQ96KR1 1074 aaKnown RBP12.64□□□□□ -0.39
SRSF4-204ENST00000489898 SPATA17Q96L03 361 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 SPATA32Q96LK8 384 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 TWNKQ96RR1 684 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 B3GNT5Q9BYG0 378 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 SLITRK6Q9H5Y7 841 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 APOBEC3GQ9HC16 384 aaKnown RBP12.64□□□□□ -0.39
SRSF4-204ENST00000489898 FBRSL1Q9HCM7 1045 aaKnown RBP12.64□□□□□ -0.39
SRSF4-204ENST00000489898 FAM13BQ9NYF5 915 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 CDH9Q9ULB4 789 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 NDRG2Q9UN36 371 aaKnown RBP12.64□□□□□ -0.39
SRSF4-204ENST00000489898 CKAP5Q14008 2032 aa12.64□□□□□ -0.39
SRSF4-204ENST00000489898 KMT2BQ9UMN6 2715 aaPredicted RBP12.63□□□□□ -0.39
SRSF4-204ENST00000489898 SOBPA7XYQ1 873 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 PDXKO00764 312 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 ZNF263O14978 683 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 AKAP3O75969 853 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 ASS1P00966 412 aaKnown RBP12.63□□□□□ -0.39
SRSF4-204ENST00000489898 OAS1P00973 400 aaKnown RBP12.63□□□□□ -0.39
SRSF4-204ENST00000489898 NR3C1P04150 777 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 RPN1P04843 607 aaKnown RBP12.63□□□□□ -0.39
SRSF4-204ENST00000489898 CSH1P0DML2 217 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 CSH2P0DML3 217 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 ARSAP15289 507 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 BDNFP23560 247 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 PCSK1P29120 753 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 CDH8P55286 799 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 VEPH1Q14D04 833 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 ARHGAP29Q52LW3 1261 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 MDH1BQ5I0G3 518 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 FSTL4Q6MZW2 842 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 FMR1NBQ8N0W7 255 aaPredicted RBP12.63□□□□□ -0.39
SRSF4-204ENST00000489898 SPATA20Q8TB22 786 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 FAM3CQ92520 227 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 E2F7Q96AV8 911 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 MSANTD3Q96H12 275 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 BCO2Q9BYV7 579 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 EPC1Q9H2F5 836 aa12.63□□□□□ -0.39
SRSF4-204ENST00000489898 TP53BP1Q12888 1972 aaPredicted RBP12.63□□□□□ -0.39
SRSF4-204ENST00000489898 FAM92AA1XBS5 289 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 F8VP50 259 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 CLDN5O00501 218 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 MYL1P05976 194 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 DDX6P26196 483 aaKnown RBP eCLIP12.62□□□□□ -0.39
SRSF4-204ENST00000489898 NOP14P78316 857 aaKnown RBP12.62□□□□□ -0.39
SRSF4-204ENST00000489898 PPP3CAQ08209 521 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 MESP2Q0VG99 397 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 KCNB1Q14721 858 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 EML3Q32P44 896 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 SPOPLQ6IQ16 392 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 VSTM1Q6UX27 236 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 HS2ST1Q7LGA3 356 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 SMYD4Q8IYR2 804 aaPredicted RBP12.62□□□□□ -0.39
SRSF4-204ENST00000489898 FUKQ8N0W3 1084 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 ADSSL1Q8N142 457 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 CELF5Q8N6W0 485 aaKnown RBP12.62□□□□□ -0.39
SRSF4-204ENST00000489898 FSIP1Q8NA03 581 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 B3GALNT2Q8NCR0 500 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 TTC8Q8TAM2 541 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 CYP2S1Q96SQ9 504 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 KIF9Q9HAQ2 790 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 EXOC1Q9NV70 894 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 SPATA6Q9NWH7 488 aaPredicted RBP12.62□□□□□ -0.39
SRSF4-204ENST00000489898 IL37Q9NZH6 218 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 USP25Q9UHP3 1055 aa12.62□□□□□ -0.39
SRSF4-204ENST00000489898 STK25O00506 426 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 MAN2B1O00754 1011 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 MAPK13O15264 365 aa12.61□□□□□ -0.39
SRSF4-204ENST00000489898 EXOC3O60645 756 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms