RNA–Protein interactions for RNA: ENST00000489707.5

PTK7-216, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 1 (best)

Gene PTK7, Length 1,935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-216ENST00000489707 RBM15Q96T37 977 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTK7-216ENST00000489707 CNPY3Q9BT09 278 aa16.3■□□□□ 0.2
PTK7-216ENST00000489707 PHACTR1Q9C0D0 580 aa16.3■□□□□ 0.2
PTK7-216ENST00000489707 RABEP2Q9H5N1 569 aa16.3■□□□□ 0.2
PTK7-216ENST00000489707 ZWILCHQ9H900 591 aa16.3■□□□□ 0.2
PTK7-216ENST00000489707 RSAD1Q9HA92 442 aa16.3■□□□□ 0.2
PTK7-216ENST00000489707 PPCSQ9HAB8 311 aa16.3■□□□□ 0.2
PTK7-216ENST00000489707 HMGXB4Q9UGU5 601 aa16.3■□□□□ 0.2
PTK7-216ENST00000489707 CDH16O75309 829 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 CAPN15O75808 1086 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 F2P00734 622 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 GPD1P21695 349 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 SEC24CP53992 1094 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 KYNUQ16719 465 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 KIZQ2M2Z5 673 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 ANKS1BQ7Z6G8 1248 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 KCTD6Q8NC69 237 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 UHMK1Q8TAS1 419 aaKnown RBP16.29■□□□□ 0.2
PTK7-216ENST00000489707 SLC35B2Q8TB61 432 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 FAM118BQ9BPY3 351 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 DDX23Q9BUQ8 820 aaKnown RBP16.29■□□□□ 0.2
PTK7-216ENST00000489707 TRIM6Q9C030 488 aaPredicted RBP16.29■□□□□ 0.2
PTK7-216ENST00000489707 ADAMTS10Q9H324 1103 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 INTS9Q9NV88 658 aaKnown RBP16.29■□□□□ 0.2
PTK7-216ENST00000489707 SETD4Q9NVD3 440 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 NINJ2Q9NZG7 142 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 C3orf70A6NLC5 250 aaPredicted RBP16.29■□□□□ 0.2
PTK7-216ENST00000489707 CHN1P15882 459 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 SLCO1A2P46721 670 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 GPS1Q13098 491 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 NR1H3Q13133 447 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 TXNRD3NBQ6F5E7 133 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 CPLX4Q7Z7G2 160 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 UNC93AQ86WB7 457 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 ZDHHC17Q8IUH5 632 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 CMASQ8NFW8 434 aaPredicted RBP16.29■□□□□ 0.2
PTK7-216ENST00000489707 PPM1EQ8WY54 764 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 CHMP6Q96FZ7 201 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 SNX27Q96L92 541 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 HESX1Q9UBX0 185 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 TSPAN16Q9UKR8 245 aa16.29■□□□□ 0.2
PTK7-216ENST00000489707 A0A087WUV0 522 aaPredicted RBP16.28■□□□□ 0.2
PTK7-216ENST00000489707 MBLAC1A4D2B0 266 aaPredicted RBP16.28■□□□□ 0.2
PTK7-216ENST00000489707 CST8O60676 142 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 CD4P01730 458 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 SMIM10L2AP0DMW4 78 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 SMIM10L2BP0DMW5 78 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 MAGEA4P43358 317 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 CPT1AP50416 773 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 ORC1Q13415 861 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 TFDP2Q14188 446 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 LONRF1Q17RB8 773 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 GKAP1Q5VSY0 366 aaPredicted RBP16.28■□□□□ 0.2
PTK7-216ENST00000489707 CENPUQ71F23 418 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 DPH6Q7L8W6 267 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 MAP7D3Q8IWC1 876 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 FAM49AQ9H0Q0 323 aaPredicted RBP16.28■□□□□ 0.2
PTK7-216ENST00000489707 CCDC134Q9H6E4 229 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 USP18Q9UMW8 372 aa16.28■□□□□ 0.2
PTK7-216ENST00000489707 UBQLN1Q9UMX0 589 aaKnown RBP16.28■□□□□ 0.2
PTK7-216ENST00000489707 APOC4-APOC2K7ER74 178 aa16.27■□□□□ 0.2
PTK7-216ENST00000489707 DYNC1LI2O43237 492 aaPredicted RBP16.27■□□□□ 0.2
PTK7-216ENST00000489707 APOC2P02655 101 aa16.27■□□□□ 0.2
PTK7-216ENST00000489707 CYP2C9P11712 490 aa16.27■□□□□ 0.2
PTK7-216ENST00000489707 DARSP14868 501 aaKnown RBP16.27■□□□□ 0.2
PTK7-216ENST00000489707 MIPP30301 263 aa16.27■□□□□ 0.2
PTK7-216ENST00000489707 IFI35P80217 286 aaPredicted RBP16.27■□□□□ 0.2
PTK7-216ENST00000489707 MAP2K5Q13163 448 aa16.27■□□□□ 0.2
PTK7-216ENST00000489707 FAM47CQ5HY64 1035 aa16.27■□□□□ 0.2
PTK7-216ENST00000489707 SUGP1Q8IWZ8 645 aaKnown RBP16.27■□□□□ 0.2
PTK7-216ENST00000489707 EMC1Q8N766 993 aa16.27■□□□□ 0.2
PTK7-216ENST00000489707 NPLOC4Q8TAT6 608 aa16.27■□□□□ 0.2
PTK7-216ENST00000489707 RSAD2Q8WXG1 361 aa16.27■□□□□ 0.2
PTK7-216ENST00000489707 ARHGEF2Q92974 986 aaKnown RBP16.27■□□□□ 0.2
PTK7-216ENST00000489707 ZNF560Q96MR9 790 aa16.27■□□□□ 0.2
PTK7-216ENST00000489707 MAK16Q9BXY0 300 aaKnown RBP16.27■□□□□ 0.2
PTK7-216ENST00000489707 NSRP1Q9H0G5 558 aaKnown RBP16.27■□□□□ 0.2
PTK7-216ENST00000489707 LRRC4CQ9HCJ2 640 aa16.27■□□□□ 0.2
PTK7-216ENST00000489707 LGALS13Q9UHV8 139 aa16.27■□□□□ 0.2
PTK7-216ENST00000489707 GINS2Q9Y248 185 aa16.27■□□□□ 0.2
PTK7-216ENST00000489707 SCN1AP35498 2009 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 C5orf60A6NFR6 353 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 MCF2LO15068 1137 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 PRPSAP2O60256 369 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 GPR32O75388 356 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 TRUB2O95900 331 aaKnown RBP16.27■□□□□ 0.19
PTK7-216ENST00000489707 HOXA11P31270 313 aaPredicted RBP16.27■□□□□ 0.19
PTK7-216ENST00000489707 PNPLA4P41247 253 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 SMTNL2Q2TAL5 461 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 OR6B2Q6IFH4 312 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 SESTD1Q86VW0 696 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 RFX6Q8HWS3 928 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 UBA3Q8TBC4 463 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 ACTL9Q8TC94 416 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 STK32AQ8WU08 396 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 ACSF2Q96CM8 615 aaPredicted RBP16.27■□□□□ 0.19
PTK7-216ENST00000489707 KATNAL1Q9BW62 490 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 ADAM7Q9H2U9 754 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 SNTG2Q9NY99 539 aa16.27■□□□□ 0.19
PTK7-216ENST00000489707 CNTN3Q9P232 1028 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms