RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 LINC00301Q8NCQ3 95 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 INTS4Q96HW7 963 aaKnown RBP12.61□□□□□ -0.39
ACTN4-206ENST00000489451 KIF9Q9HAQ2 790 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 RXFP3Q9NSD7 469 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 TMEM30AQ9NV96 361 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 INTS13Q9NVM9 706 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 KBTBD4Q9NVX7 518 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 ZMYM5Q9UJ78 669 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 RAB23Q9ULC3 237 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 PCDHB13Q9Y5F0 798 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 SPEGQ15772 3267 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 GCN1Q92616 2671 aaKnown RBP12.61□□□□□ -0.39
ACTN4-206ENST00000489451 FRYQ5TBA9 3013 aa12.61□□□□□ -0.39
ACTN4-206ENST00000489451 K7ELQ4 463 aaPredicted RBP12.6□□□□□ -0.39
ACTN4-206ENST00000489451 TGFB1I1O43294 461 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 HUS1O60921 280 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 RNF40O75150 1001 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 LDHAP00338 332 aaKnown RBP12.6□□□□□ -0.39
ACTN4-206ENST00000489451 KRT19P08727 400 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 CHRM1P11229 460 aaPredicted RBP12.6□□□□□ -0.39
ACTN4-206ENST00000489451 GJA4P35212 333 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 TXLNAP40222 546 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 GALK1P51570 392 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 RBP5P82980 135 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 MYL7Q01449 175 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 FAM160A1Q05DH4 1040 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 EHHADHQ08426 723 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 ALCAMQ13740 583 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 CCDC6Q16204 474 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 TAF12Q16514 161 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 CSRP2Q16527 193 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 EML3Q32P44 896 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.6□□□□□ -0.39
ACTN4-206ENST00000489451 SYCP3Q8IZU3 236 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 SPATA18Q8TC71 538 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 NOC3LQ8WTT2 800 aaKnown RBP12.6□□□□□ -0.39
ACTN4-206ENST00000489451 DDX1Q92499 740 aaKnown RBP12.6□□□□□ -0.39
ACTN4-206ENST00000489451 MRPS31Q92665 395 aaKnown RBP12.6□□□□□ -0.39
ACTN4-206ENST00000489451 MYLPFQ96A32 169 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 TRIM9Q9C026 710 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 THG1LQ9NWX6 298 aaKnown RBP12.6□□□□□ -0.39
ACTN4-206ENST00000489451 LHX6Q9UPM6 363 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 WNT6Q9Y6F9 365 aa12.6□□□□□ -0.39
ACTN4-206ENST00000489451 TULP1O00294 542 aaPredicted RBP12.59□□□□□ -0.39
ACTN4-206ENST00000489451 CST3P01034 146 aaPredicted RBP12.59□□□□□ -0.39
ACTN4-206ENST00000489451 HSP90AA1P07900 732 aaKnown RBP12.59□□□□□ -0.39
ACTN4-206ENST00000489451 TMEM191BP0C7N4 346 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 CASP1P29466 404 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 MAGEA11P43364 429 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 RAP1GAPP47736 663 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 LHX1P48742 406 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 CACNA2D1P54289 1103 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 RPL10AP62906 217 aaKnown RBP12.59□□□□□ -0.39
ACTN4-206ENST00000489451 SF3A2Q15428 464 aaKnown RBP12.59□□□□□ -0.39
ACTN4-206ENST00000489451 SHC4Q6S5L8 630 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 LRSAM1Q6UWE0 723 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 UNQ6494/PRO21346Q6UXR6 183 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 KBTBD6Q86V97 674 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 SCN4BQ8IWT1 228 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 ARL14EPQ8N8R7 260 aaPredicted RBP12.59□□□□□ -0.39
ACTN4-206ENST00000489451 CACTINQ8WUQ7 758 aaKnown RBP12.59□□□□□ -0.39
ACTN4-206ENST00000489451 OSCP1Q8WVF1 389 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 GAB3Q8WWW8 586 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 FUBP3Q96I24 572 aaKnown RBP eCLIP12.59□□□□□ -0.39
ACTN4-206ENST00000489451 HPDLQ96IR7 371 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 SYT15Q9BQS2 421 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 MRPL45Q9BRJ2 306 aaKnown RBP12.59□□□□□ -0.39
ACTN4-206ENST00000489451 TNMDQ9H2S6 317 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 LINC00597Q9H2U6 94 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 TMEM206Q9H813 350 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 ECT2Q9H8V3 914 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 TRPC7Q9HCX4 862 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 HSPBP1Q9NZL4 362 aa12.59□□□□□ -0.39
ACTN4-206ENST00000489451 CCDC163A0A0D9SF12 145 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 C1QTNF9BB2RNN3 333 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 STX6O43752 255 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 C1QTNF9P0C862 333 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 TCF3P15923 654 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 WARSP23381 471 aaKnown RBP12.58□□□□□ -0.4
ACTN4-206ENST00000489451 BDNFP23560 247 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 GRSF1Q12849 480 aaKnown RBP eCLIP12.58□□□□□ -0.4
ACTN4-206ENST00000489451 PDGFRLQ15198 375 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 N4BP2L1Q5TBK1 243 aaPredicted RBP12.58□□□□□ -0.4
ACTN4-206ENST00000489451 SPATA2LQ8IUW3 424 aaPredicted RBP12.58□□□□□ -0.4
ACTN4-206ENST00000489451 HSCBQ8IWL3 235 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 CCDC65Q8IXS2 484 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 SH3RF2Q8TEC5 729 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 ZNF516Q92618 1163 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 PCED1BQ96HM7 432 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 ANKRD36BP1Q96IX9 119 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 HHIPQ96QV1 700 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 DPEP3Q9H4B8 488 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 SMOC1Q9H4F8 434 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 AGPAT3Q9NRZ7 376 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 UXTQ9UBK9 157 aaPredicted RBP12.58□□□□□ -0.4
ACTN4-206ENST00000489451 MYOFQ9NZM1 2061 aa12.58□□□□□ -0.4
ACTN4-206ENST00000489451 TRAV19A0A0A6YYK7 116 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 ZNF233A6NK53 670 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 TM4SF5O14894 197 aa12.57□□□□□ -0.4
ACTN4-206ENST00000489451 AXIN1O15169 862 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms