RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 MTMR12Q9C0I1 747 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 PDE11AQ9HCR9 933 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 PANK4Q9NVE7 773 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 FBXO2Q9UK22 296 aaPredicted RBP12.78□□□□□ -0.36
SFXN3-207ENST00000489434 ANGPTL2Q9UKU9 493 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 CLIC4Q9Y696 253 aa12.78□□□□□ -0.36
SFXN3-207ENST00000489434 GOLGA8IPA6NC78 632 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 GOLGA8JA6NMD2 632 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 KRT37O76014 449 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 NFATC1O95644 943 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 PFKLP17858 780 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 HDCP19113 662 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 ANXA13P27216 316 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 HOXC13P31276 330 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 DMC1Q14565 340 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 ZNF77Q15935 545 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 DUOXA2Q1HG44 320 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 PLK5Q496M5 336 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 VSTM1Q6UX27 236 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 CCDC65Q8IXS2 484 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 GPD1LQ8N335 351 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 SH3RF2Q8TEC5 729 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 HPDLQ96IR7 371 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 CEP295NLQ96MC4 621 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 PKMYT1Q99640 499 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 CBWD1Q9BRT8 395 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 LRRC27Q9C0I9 530 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 PCIF1Q9H4Z3 704 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 FBRSL1Q9HCM7 1045 aaKnown RBP12.77□□□□□ -0.37
SFXN3-207ENST00000489434 MAGEC2Q9UBF1 373 aaPredicted RBP12.77□□□□□ -0.37
SFXN3-207ENST00000489434 EBF1Q9UH73 591 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 WNT6Q9Y6F9 365 aa12.77□□□□□ -0.37
SFXN3-207ENST00000489434 ZNF233A6NK53 670 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 GABRDO14764 452 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 TADA3O75528 432 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 GBP1P32455 592 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 GRIK1P39086 918 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 WNT7BP56706 349 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 CEBPZQ03701 1054 aaKnown RBP12.76□□□□□ -0.37
SFXN3-207ENST00000489434 USP4Q13107 963 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 SOWAHAQ2M3V2 549 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 EML3Q32P44 896 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 USP39Q53GS9 565 aaKnown RBP12.76□□□□□ -0.37
SFXN3-207ENST00000489434 PLA2G2CQ5R387 149 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 RNF43Q68DV7 783 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 FAM171BQ6P995 826 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 ARL14EPQ8N8R7 260 aaPredicted RBP12.76□□□□□ -0.37
SFXN3-207ENST00000489434 ZSWIM2Q8NEG5 633 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 TSTD1Q8NFU3 115 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 SPATA17Q96L03 361 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 CLIC6Q96NY7 704 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 SLC22A12Q96S37 553 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 SYT15Q9BQS2 421 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 KIAA1586Q9HCI6 787 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 INTS13Q9NVM9 706 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 TRPM5Q9NZQ8 1165 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 CDH9Q9ULB4 789 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 ARHGAP26Q9UNA1 814 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 ANAPC1Q9H1A4 1944 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 EML5Q05BV3 1969 aa12.76□□□□□ -0.37
SFXN3-207ENST00000489434 FRMD3A2A2Y4 597 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 SLC9A3R1O14745 358 aaPredicted RBP12.75□□□□□ -0.37
SFXN3-207ENST00000489434 CAVIN2O95810 425 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 PPP3CCP48454 512 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 CASP5P51878 434 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 DGKEP52429 567 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 CYP27A1Q02318 531 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 CREB5Q02930 508 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 DENND5BQ6ZUT9 1274 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 OSTM1Q86WC4 334 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 RIN3Q8TB24 985 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 MMS19Q96T76 1030 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 PANK2Q9BZ23 570 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 SNX25Q9H3E2 840 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 GCNT4Q9P109 453 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 SIX4Q9UIU6 781 aa12.75□□□□□ -0.37
SFXN3-207ENST00000489434 C2orf78A6NCI8 922 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 TM4SF5O14894 197 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 TRIM66O15016 1216 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 ATP2C2O75185 946 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 PRPF6O94906 941 aaKnown RBP12.74□□□□□ -0.37
SFXN3-207ENST00000489434 PDGFRBP09619 1106 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 TCF3P15923 654 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 BDNFP23560 247 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 PSMC1P62191 440 aaKnown RBP12.74□□□□□ -0.37
SFXN3-207ENST00000489434 AMPD3Q01432 767 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 N4BP2L1Q5TBK1 243 aaPredicted RBP12.74□□□□□ -0.37
SFXN3-207ENST00000489434 NAIF1Q69YI7 327 aaPredicted RBP12.74□□□□□ -0.37
SFXN3-207ENST00000489434 WDR49Q8IV35 697 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 KIAA1958Q8N8K9 716 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 CXorf38Q8TB03 319 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 MYLPFQ96A32 169 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 LSM14BQ9BX40 385 aaKnown RBP12.74□□□□□ -0.37
SFXN3-207ENST00000489434 DUSP15Q9H1R2 295 aaPredicted RBP12.74□□□□□ -0.37
SFXN3-207ENST00000489434 RXFP3Q9NSD7 469 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 POLR3BQ9NW08 1133 aaPredicted RBP12.74□□□□□ -0.37
SFXN3-207ENST00000489434 ABCA7Q8IZY2 2146 aa12.74□□□□□ -0.37
SFXN3-207ENST00000489434 HELZP42694 1942 aaKnown RBP12.74□□□□□ -0.37
SFXN3-207ENST00000489434 NUP205Q92621 2012 aa12.73□□□□□ -0.37
SFXN3-207ENST00000489434 THADAQ6YHU6 1953 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms