RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 B3GNT5Q9BYG0 378 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 CSNK1G1Q9HCP0 422 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 TJP2Q9UDY2 1190 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 CDC23Q9UJX2 597 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 FAN1Q9Y2M0 1017 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 HYOU1Q9Y4L1 999 aa12.13□□□□□ -0.47
C9orf3-220ENST00000489318 FAM170AA1A519 330 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 TMEM191CA6NGB0 347 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 SIGLEC16A6NMB1 481 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 E5RJQ4 531 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 TULP2O00295 520 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 CES2O00748 559 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 TBC1D4O60343 1298 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 TADA2AO75478 443 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 GABBR2O75899 941 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 UPP2O95045 317 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 FTCDO95954 541 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 TCP1P17987 556 aaKnown RBP12.12□□□□□ -0.47
C9orf3-220ENST00000489318 LAG3P18627 525 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 ACADSBP45954 432 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 SNX16P57768 344 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 TSPY1Q01534 308 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 VARS2Q5ST30 1063 aaKnown RBP12.12□□□□□ -0.47
C9orf3-220ENST00000489318 CYP4A22Q5TCH4 519 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 ZNF280DQ6N043 979 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 DNAJC24Q6P3W2 148 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 NIPA2Q8N8Q9 360 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 FEZF2Q8TBJ5 459 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 CD101Q93033 1021 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 MYLPFQ96A32 169 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 SMARCD1Q96GM5 515 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 IGSF21Q96ID5 467 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 GPR62Q9BZJ7 368 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 UBXN6Q9BZV1 441 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 ZCWPW1Q9H0M4 648 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 GOLPH3Q9H4A6 298 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 PNPLA8Q9NP80 782 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 KRT82Q9NSB4 513 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 CHORDC1Q9UHD1 332 aaPredicted RBP12.12□□□□□ -0.47
C9orf3-220ENST00000489318 ANAPC7Q9UJX3 599 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 SAR1BQ9Y6B6 198 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 MYO16Q9Y6X6 1858 aa12.12□□□□□ -0.47
C9orf3-220ENST00000489318 PLXNA4Q9HCM2 1894 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 OR6C75A6NL08 312 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 MIF4GDA9UHW6 222 aaKnown RBP12.11□□□□□ -0.47
C9orf3-220ENST00000489318 NCK2O43639 380 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 URI1O94763 535 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-220ENST00000489318 PROSCO94903 275 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 GJB5O95377 273 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 FGBP02675 491 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 LINC00271P0C7V0 271 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 FAM200BP0CF97 657 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 CTNNA2P26232 953 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 SLC1A1P43005 524 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 EPHB4P54760 987 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 ZNF252P-AS1Q0IIN9 211 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 WHAMMP3Q1A5X7 153 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 CFAP221Q4G0U5 840 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 RAB41Q5JT25 222 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 TMEM240Q5SV17 173 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 RASIP1Q5U651 963 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 FAM171A1Q5VUB5 890 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 OLFML1Q6UWY5 402 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 FAM183BPQ6ZVS7 135 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 ZNF365Q70YC5 407 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 ARCQ7LC44 396 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 OTOP2Q7RTS6 562 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 PEX26Q7Z412 305 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 PIGZQ86VD9 579 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 LRRTM3Q86VH5 581 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 SLC39A11Q8N1S5 342 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 ZMIZ2Q8NF64 920 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 SP7Q8TDD2 431 aaPredicted RBP12.11□□□□□ -0.47
C9orf3-220ENST00000489318 HERVK_113Q902F9 699 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 FUBP3Q96I24 572 aaKnown RBP eCLIP12.11□□□□□ -0.47
C9orf3-220ENST00000489318 OSBPL9Q96SU4 736 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 SLC9A7Q96T83 725 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.11□□□□□ -0.47
C9orf3-220ENST00000489318 VN1R3Q9BXE9 311 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 AMFRQ9UKV5 643 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 ALG6Q9Y672 507 aa12.11□□□□□ -0.47
C9orf3-220ENST00000489318 GREB1Q4ZG55 1949 aa12.1□□□□□ -0.47
C9orf3-220ENST00000489318 HHLA1C9JL84 531 aa12.1□□□□□ -0.47
C9orf3-220ENST00000489318 MYO1FO00160 1098 aa12.1□□□□□ -0.47
C9orf3-220ENST00000489318 CLDN5O00501 218 aa12.1□□□□□ -0.47
C9orf3-220ENST00000489318 DPYSL4O14531 572 aa12.1□□□□□ -0.47
C9orf3-220ENST00000489318 RIOK3O14730 519 aaKnown RBP12.1□□□□□ -0.47
C9orf3-220ENST00000489318 DDX3YO15523 660 aaKnown RBP12.1□□□□□ -0.47
C9orf3-220ENST00000489318 PAPSS1O43252 624 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-220ENST00000489318 BEST1O76090 585 aa12.1□□□□□ -0.47
C9orf3-220ENST00000489318 KRT3P12035 628 aa12.1□□□□□ -0.47
C9orf3-220ENST00000489318 COMTP21964 271 aa12.1□□□□□ -0.47
C9orf3-220ENST00000489318 CTNNA1P35221 906 aaKnown RBP12.1□□□□□ -0.47
C9orf3-220ENST00000489318 PBX3P40426 434 aa12.1□□□□□ -0.47
C9orf3-220ENST00000489318 ALDH7A1P49419 539 aaKnown RBP12.1□□□□□ -0.47
C9orf3-220ENST00000489318 TERF1P54274 439 aa12.1□□□□□ -0.47
C9orf3-220ENST00000489318 SLC8A3P57103 927 aa12.1□□□□□ -0.47
C9orf3-220ENST00000489318 RPL7AP62424 266 aaKnown RBP12.1□□□□□ -0.47
C9orf3-220ENST00000489318 BTG3Q14201 252 aaPredicted RBP12.1□□□□□ -0.47
C9orf3-220ENST00000489318 MESDQ14696 234 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms