RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 PNPLA8Q9NP80 782 aa13.55□□□□□ -0.24
TOP3A-206ENST00000489131 STK39Q9UEW8 545 aa13.55□□□□□ -0.24
TOP3A-206ENST00000489131 SNX12Q9UMY4 172 aa13.55□□□□□ -0.24
TOP3A-206ENST00000489131 PRG3Q9Y2Y8 225 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-206ENST00000489131 MRFAP1Q9Y605 127 aa13.55□□□□□ -0.24
TOP3A-206ENST00000489131 MKI67P46013 3256 aaKnown RBP13.54□□□□□ -0.24
TOP3A-206ENST00000489131 MYBPHLA2RUH7 354 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 OR6C75A6NL08 312 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 MIF4GDA9UHW6 222 aaKnown RBP13.54□□□□□ -0.24
TOP3A-206ENST00000489131 GJB5O95377 273 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 LINC00271P0C7V0 271 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 TCP1P17987 556 aaKnown RBP13.54□□□□□ -0.24
TOP3A-206ENST00000489131 SSTR3P32745 418 aaPredicted RBP13.54□□□□□ -0.24
TOP3A-206ENST00000489131 SLC1A1P43005 524 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 ALDH7A1P49419 539 aaKnown RBP13.54□□□□□ -0.24
TOP3A-206ENST00000489131 NAP1L1P55209 391 aaKnown RBP13.54□□□□□ -0.24
TOP3A-206ENST00000489131 SLC8A3P57103 927 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 TSPY1Q01534 308 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 SMARCB1Q12824 385 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 CFAP221Q4G0U5 840 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 MDH1BQ5I0G3 518 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 VARS2Q5ST30 1063 aaKnown RBP13.54□□□□□ -0.24
TOP3A-206ENST00000489131 PMF1Q6P1K2 205 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 CLEC20AQ6ZU45 233 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 ZNF365Q70YC5 407 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 DAAM2Q86T65 1068 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 FAM35AQ86V20 835 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 C7orf61Q8IZ16 206 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 SLC39A11Q8N1S5 342 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 SCML4Q8N228 414 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 UBA3Q8TBC4 463 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 FEZF2Q8TBJ5 459 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
TOP3A-206ENST00000489131 BCL7CQ8WUZ0 217 aaPredicted RBP13.54□□□□□ -0.24
TOP3A-206ENST00000489131 ZNF592Q92610 1267 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 CD101Q93033 1021 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 SMARCD1Q96GM5 515 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 FUBP3Q96I24 572 aaKnown RBP eCLIP13.54□□□□□ -0.24
TOP3A-206ENST00000489131 IGSF21Q96ID5 467 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 SLC9A7Q96T83 725 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 LPIN3Q9BQK8 851 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 CHST7Q9NS84 486 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 HCSTQ9UBK5 93 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 CDC23Q9UJX2 597 aa13.54□□□□□ -0.24
TOP3A-206ENST00000489131 GABBR2O75899 941 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 PROSCO94903 275 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 UPP2O95045 317 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 FAM200BP0CF97 657 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 EPHB4P54760 987 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 NFE2Q16621 373 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-206ENST00000489131 RAB41Q5JT25 222 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 ZNF280DQ6N043 979 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 DNAJC24Q6P3W2 148 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 KCNT2Q6UVM3 1135 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 OLFML1Q6UWY5 402 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 ANKS3Q6ZW76 656 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 PEX26Q7Z412 305 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 TMEM173Q86WV6 379 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-206ENST00000489131 DCP1BQ8IZD4 617 aaKnown RBP13.53□□□□□ -0.24
TOP3A-206ENST00000489131 CLP1Q92989 425 aaKnown RBP13.53□□□□□ -0.24
TOP3A-206ENST00000489131 MYLPFQ96A32 169 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 ZNF558Q96NG5 402 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 IP6K2Q9UHH9 426 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 ANAPC7Q9UJX3 599 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 TMEM59LQ9UK28 342 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 HYOU1Q9Y4L1 999 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 BACE2Q9Y5Z0 518 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 ALG6Q9Y672 507 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 SAR1BQ9Y6B6 198 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 KIAA1671Q9BY89 1806 aa13.53□□□□□ -0.24
TOP3A-206ENST00000489131 HHLA1C9JL84 531 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 E5RJQ4 531 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 H7C4K7 107 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 MYO1FO00160 1098 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 TULP2O00295 520 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 ENC1O14682 589 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 PAPSS1O43252 624 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-206ENST00000489131 CTNNA2P26232 953 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 ADORA2BP29275 332 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 CTNNA1P35221 906 aaKnown RBP13.52□□□□□ -0.25
TOP3A-206ENST00000489131 PPM1AP35813 382 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 MAGEA11P43364 429 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 TERF1P54274 439 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 BTG3Q14201 252 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-206ENST00000489131 ACAP1Q15027 740 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 CCDC142Q17RM4 750 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 WHAMMP3Q1A5X7 153 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 C2CD6Q53TS8 623 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 CYP4A22Q5TCH4 519 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 FAM171A1Q5VUB5 890 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 LLGL2Q6P1M3 1020 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 C4orf50Q6ZRC1 276 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 SLC26A9Q7LBE3 791 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 OTOP2Q7RTS6 562 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 ZNF572Q7Z3I7 529 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-206ENST00000489131 PIGZQ86VD9 579 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 LRRTM3Q86VH5 581 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 COLGALT1Q8NBJ5 622 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 ZMIZ2Q8NF64 920 aa13.52□□□□□ -0.25
TOP3A-206ENST00000489131 C2orf15Q8WU43 125 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms