RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 PCED1BQ96HM7 432 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 CEP295NLQ96MC4 621 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 TIGD1Q96MW7 591 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 LRRC3Q9BY71 257 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 OSBPL6Q9BZF3 934 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 C8orf33Q9H7E9 229 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-232ENST00000489053 LTB4R2Q9NPC1 389 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 CRTAC1Q9NQ79 661 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.72□□□□□ -0.85
HDAC6-232ENST00000489053 DMAC2Q9NW81 257 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 OBP2AQ9NY56 170 aa9.72□□□□□ -0.85
HDAC6-232ENST00000489053 ZNF318Q5VUA4 2279 aa9.71□□□□□ -0.85
HDAC6-232ENST00000489053 F8VP50 259 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 SLC16A3O15427 465 aaKnown RBP9.71□□□□□ -0.86
HDAC6-232ENST00000489053 AKAP3O75969 853 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 NOL4O94818 638 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 RTN3O95197 1032 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-232ENST00000489053 GLULP15104 373 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 GTF2H1P32780 548 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 RAP1GAPP47736 663 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 PPP3CCP48454 512 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 IFNAR2P48551 515 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 MXI1P50539 228 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 CDH8P55286 799 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 DLG4P78352 724 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 FKBP3Q00688 224 aaKnown RBP9.71□□□□□ -0.86
HDAC6-232ENST00000489053 LRRC63Q05C16 580 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 CETN1Q12798 172 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 NFIL3Q16649 462 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 ITPRIPL2Q3MIP1 535 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 ZACNQ401N2 412 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 CCDC40Q4G0X9 1142 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 KRT39Q6A163 491 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 TXNDC8Q6A555 127 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 SV2AQ7L0J3 742 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 MON1AQ86VX9 555 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 C1orf210Q8IVY1 113 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 TTC39CQ8N584 583 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 STKLD1Q8NE28 680 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 TTC8Q8TAM2 541 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 TMEM174Q8WUU8 243 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 SPATA17Q96L03 361 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 HINFPQ9BQA5 517 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 MKNK1Q9BUB5 465 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 SLC46A2Q9BY10 475 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 NIF3L1Q9GZT8 377 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 SMG9Q9H0W8 520 aaKnown RBP9.71□□□□□ -0.86
HDAC6-232ENST00000489053 VRTNQ9H8Y1 702 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 TMEM8AQ9HCN3 771 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 DMAP1Q9NPF5 467 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-232ENST00000489053 TRPV5Q9NQA5 729 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 TDP1Q9NUW8 608 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 CHMP5Q9NZZ3 219 aa9.71□□□□□ -0.86
HDAC6-232ENST00000489053 BICDL2A1A5D9 508 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 AP1G2O75843 785 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 PRAMEF12O95522 483 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 ASS1P00966 412 aaKnown RBP9.7□□□□□ -0.86
HDAC6-232ENST00000489053 C4BPAP04003 597 aaKnown RBP9.7□□□□□ -0.86
HDAC6-232ENST00000489053 HMGA1P17096 107 aaKnown RBP9.7□□□□□ -0.86
HDAC6-232ENST00000489053 HDCP19113 662 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 CD58P19256 250 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 CCNE1P24864 410 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 WEE1P30291 646 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 PRCPP42785 496 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 NDST1P52848 882 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 SLC8A3P57103 927 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 NOP14P78316 857 aaKnown RBP9.7□□□□□ -0.86
HDAC6-232ENST00000489053 CLDN10P78369 228 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 ENPEPQ07075 957 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 FCHO2Q0JRZ9 810 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 NR1H3Q13133 447 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 PDGFRLQ15198 375 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 CCDC142Q17RM4 750 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 SCARA3Q6AZY7 606 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 ISM2Q6H9L7 571 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 KLHL10Q6JEL2 608 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 LIMS2Q7Z4I7 341 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 FRMD5Q7Z6J6 570 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 ACOT1Q86TX2 421 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 UNC93AQ86WB7 457 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 CPA6Q8N4T0 437 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 PDZD8Q8NEN9 1154 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 NKD2Q969F2 451 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-232ENST00000489053 FBXO32Q969P5 355 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 SMARCD1Q96GM5 515 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 ZFYVE19Q96K21 471 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 C8orf48Q96LL4 319 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 MYRFLQ96LU7 910 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 PKMYT1Q99640 499 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 NT5C1AQ9BXI3 368 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 ZNF518BQ9C0D4 1074 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 XYLT2Q9H1B5 865 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 DPEP3Q9H4B8 488 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 CYP3A43Q9HB55 503 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 IL21Q9HBE4 155 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 KRT82Q9NSB4 513 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 ARMCX3Q9UH62 379 aaPredicted RBP9.7□□□□□ -0.86
HDAC6-232ENST00000489053 PCDHA5Q9Y5H7 936 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 SCN1AP35498 2009 aa9.7□□□□□ -0.86
HDAC6-232ENST00000489053 NRG2O14511 850 aaPredicted RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms