RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 TCEAL3Q969E4 200 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 SAAL1Q96ER3 474 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 OLFML3Q9NRN5 406 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 ARHGAP26Q9UNA1 814 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 R3HCC1Q9Y3T6 440 aaKnown RBP20.43■□□□□ 0.86
GGPS1-206ENST00000488594 TCHHQ07283 1943 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 DENND4CQ5VZ89 1909 aa20.43■□□□□ 0.86
GGPS1-206ENST00000488594 DCLK1O15075 740 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 NFATC1O95644 943 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 KRT19P08727 400 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 HDCP19113 662 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 GBP1P32455 592 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 DGKEP52429 567 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 C8orf34Q49A92 452 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 USP39Q53GS9 565 aaKnown RBP20.42■□□□□ 0.86
GGPS1-206ENST00000488594 DAB2IPQ5VWQ8 1189 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 PSAPL1Q6NUJ1 521 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 DPH6Q7L8W6 267 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 SCN4BQ8IWT1 228 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 SYCP3Q8IZU3 236 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 KIAA1958Q8N8K9 716 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 ARL14EPQ8N8R7 260 aaPredicted RBP20.42■□□□□ 0.86
GGPS1-206ENST00000488594 EPSTI1Q96J88 318 aa20.42■□□□□ 0.86
GGPS1-206ENST00000488594 GCNT3O95395 438 aa20.41■□□□□ 0.86
GGPS1-206ENST00000488594 TXLNAP40222 546 aa20.41■□□□□ 0.86
GGPS1-206ENST00000488594 MYO1EQ12965 1108 aa20.41■□□□□ 0.86
GGPS1-206ENST00000488594 MAPRE1Q15691 268 aaKnown RBP20.41■□□□□ 0.86
GGPS1-206ENST00000488594 FAM171BQ6P995 826 aa20.41■□□□□ 0.86
GGPS1-206ENST00000488594 VSTM1Q6UX27 236 aa20.41■□□□□ 0.86
GGPS1-206ENST00000488594 SV2BQ7L1I2 683 aa20.41■□□□□ 0.86
GGPS1-206ENST00000488594 SPATA17Q96L03 361 aa20.41■□□□□ 0.86
GGPS1-206ENST00000488594 EHD2Q9NZN4 543 aa20.41■□□□□ 0.86
GGPS1-206ENST00000488594 ZFHX4Q86UP3 3567 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 OBSL1O75147 1896 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 C2orf78A6NCI8 922 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 MYMKA6NI61 221 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 TMEM191BP0C7N4 346 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 NOVA1P51513 510 aaKnown RBP20.4■□□□□ 0.86
GGPS1-206ENST00000488594 SOWAHAQ2M3V2 549 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 RRAGBQ5VZM2 374 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 USP49Q70CQ1 688 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 OSTM1Q86WC4 334 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 RASSF3Q86WH2 238 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 USP33Q8TEY7 942 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 DNAJC19Q96DA6 116 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 MTMR12Q9C0I1 747 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 TBC1D7Q9P0N9 293 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 SIX4Q9UIU6 781 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 CDH9Q9ULB4 789 aa20.4■□□□□ 0.86
GGPS1-206ENST00000488594 ZNF638Q14966 1978 aaKnown RBP20.4■□□□□ 0.86
GGPS1-206ENST00000488594 LNP1A1A4G5 178 aa20.39■□□□□ 0.85
GGPS1-206ENST00000488594 C4orf47A7E2U8 309 aa20.39■□□□□ 0.85
GGPS1-206ENST00000488594 KHNYNO15037 678 aaKnown RBP20.39■□□□□ 0.85
GGPS1-206ENST00000488594 KIAA0391O15091 583 aaKnown RBP20.39■□□□□ 0.85
GGPS1-206ENST00000488594 PMS2CLQ68D20 193 aa20.39■□□□□ 0.85
GGPS1-206ENST00000488594 ZSWIM2Q8NEG5 633 aa20.39■□□□□ 0.85
GGPS1-206ENST00000488594 ANKRD36BP1Q96IX9 119 aa20.39■□□□□ 0.85
GGPS1-206ENST00000488594 CNOT6LQ96LI5 555 aaKnown RBP20.39■□□□□ 0.85
GGPS1-206ENST00000488594 LINC00597Q9H2U6 94 aa20.39■□□□□ 0.85
GGPS1-206ENST00000488594 PDE11AQ9HCR9 933 aa20.39■□□□□ 0.85
GGPS1-206ENST00000488594 MAGEC2Q9UBF1 373 aaPredicted RBP20.39■□□□□ 0.85
GGPS1-206ENST00000488594 GOLGA8IPA6NC78 632 aa20.38■□□□□ 0.85
GGPS1-206ENST00000488594 GOLGA8JA6NMD2 632 aa20.38■□□□□ 0.85
GGPS1-206ENST00000488594 CD2BP2O95400 341 aaKnown RBP20.38■□□□□ 0.85
GGPS1-206ENST00000488594 PROS1P07225 676 aa20.38■□□□□ 0.85
GGPS1-206ENST00000488594 PPP3CCP48454 512 aa20.38■□□□□ 0.85
GGPS1-206ENST00000488594 CCDC142Q17RM4 750 aa20.38■□□□□ 0.85
GGPS1-206ENST00000488594 SYT15Q9BQS2 421 aa20.38■□□□□ 0.85
GGPS1-206ENST00000488594 CBWD1Q9BRT8 395 aa20.38■□□□□ 0.85
GGPS1-206ENST00000488594 TRPM5Q9NZQ8 1165 aa20.38■□□□□ 0.85
GGPS1-206ENST00000488594 SRPRBQ9Y5M8 271 aaKnown RBP20.38■□□□□ 0.85
GGPS1-206ENST00000488594 EML5Q05BV3 1969 aa20.38■□□□□ 0.85
GGPS1-206ENST00000488594 ATG2BQ96BY7 2078 aa20.38■□□□□ 0.85
GGPS1-206ENST00000488594 K7EQS6 105 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 HCRTO43612 131 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 IDEP14735 1019 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 ANXA13P27216 316 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 GRIK1P39086 918 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 OPRD1P41143 372 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 CASP5P51878 434 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 MRPS21P82921 87 aaKnown RBP20.37■□□□□ 0.85
GGPS1-206ENST00000488594 SURF1Q15526 300 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 C2orf27AQ580R0 203 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 ANO7Q6IWH7 933 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 CCDC73Q6ZRK6 1079 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 DENND5BQ6ZUT9 1274 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 LIMS2Q7Z4I7 341 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 GPD1LQ8N335 351 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 MYLPFQ96A32 169 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 HPDLQ96IR7 371 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 TMEM9BQ9NQ34 198 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 INTS13Q9NVM9 706 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 FBXO2Q9UK22 296 aaPredicted RBP20.37■□□□□ 0.85
GGPS1-206ENST00000488594 MMP17Q9ULZ9 603 aa20.37■□□□□ 0.85
GGPS1-206ENST00000488594 FRMD3A2A2Y4 597 aa20.36■□□□□ 0.85
GGPS1-206ENST00000488594 LEFTY2O00292 366 aa20.36■□□□□ 0.85
GGPS1-206ENST00000488594 SLC9A3R1O14745 358 aaPredicted RBP20.36■□□□□ 0.85
GGPS1-206ENST00000488594 ALDH1A2O94788 518 aa20.36■□□□□ 0.85
GGPS1-206ENST00000488594 TNNC2P02585 160 aa20.36■□□□□ 0.85
GGPS1-206ENST00000488594 CRY1Q16526 586 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms