RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 USP13Q92995 863 aaPredicted RBP24.67■■□□□ 1.54
CUL4A-209ENST00000488558 PCED1BQ96HM7 432 aa24.67■■□□□ 1.54
CUL4A-209ENST00000488558 ZFYVE19Q96K21 471 aa24.67■■□□□ 1.54
CUL4A-209ENST00000488558 SMG9Q9H0W8 520 aaKnown RBP24.67■■□□□ 1.54
CUL4A-209ENST00000488558 TDP1Q9NUW8 608 aa24.67■■□□□ 1.54
CUL4A-209ENST00000488558 TRAF3IP3Q9Y228 551 aa24.67■■□□□ 1.54
CUL4A-209ENST00000488558 PCDHGA2Q9Y5H1 932 aa24.67■■□□□ 1.54
CUL4A-209ENST00000488558 FAM186AA6NE01 2351 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 RIF1Q5UIP0 2472 aaKnown RBP24.66■■□□□ 1.54
CUL4A-209ENST00000488558 SPECC1L-ADORA2AF8WAN1 911 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 TRIM66O15016 1216 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 PDGFRBP09619 1106 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 CHRNB1P11230 501 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 DPYDQ12882 1025 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 MTAPQ13126 283 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 BIRC3Q13489 604 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 LRRC32Q14392 662 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 NFIL3Q16649 462 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 TXNDC8Q6A555 127 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 OR6B3Q8NGW1 331 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 FAM126AQ9BYI3 521 aaPredicted RBP24.66■■□□□ 1.54
CUL4A-209ENST00000488558 LMAN1LQ9HAT1 526 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 GTSE1Q9NYZ3 720 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 EHD2Q9NZN4 543 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 NME7Q9Y5B8 376 aa24.66■■□□□ 1.54
CUL4A-209ENST00000488558 HELZP42694 1942 aaKnown RBP24.66■■□□□ 1.54
CUL4A-209ENST00000488558 MAPK13O15264 365 aa24.65■■□□□ 1.54
CUL4A-209ENST00000488558 CALUO43852 315 aaPredicted RBP24.65■■□□□ 1.54
CUL4A-209ENST00000488558 C4BPAP04003 597 aaKnown RBP24.65■■□□□ 1.54
CUL4A-209ENST00000488558 PRR29P0C7W0 189 aa24.65■■□□□ 1.54
CUL4A-209ENST00000488558 CYP27A1Q02318 531 aa24.65■■□□□ 1.54
CUL4A-209ENST00000488558 CSTF1Q05048 431 aaKnown RBP24.65■■□□□ 1.54
CUL4A-209ENST00000488558 BECN1Q14457 450 aa24.65■■□□□ 1.54
CUL4A-209ENST00000488558 KCNB1Q14721 858 aa24.65■■□□□ 1.54
CUL4A-209ENST00000488558 ZNF699Q32M78 642 aa24.65■■□□□ 1.54
CUL4A-209ENST00000488558 ITPRIPL2Q3MIP1 535 aa24.65■■□□□ 1.54
CUL4A-209ENST00000488558 TMC2Q8TDI7 906 aa24.65■■□□□ 1.54
CUL4A-209ENST00000488558 FAM83CQ9BQN1 747 aa24.65■■□□□ 1.54
CUL4A-209ENST00000488558 ELOVL4Q9GZR5 314 aa24.65■■□□□ 1.54
CUL4A-209ENST00000488558 GOLPH3LQ9H4A5 285 aa24.65■■□□□ 1.54
CUL4A-209ENST00000488558 CCL26Q9Y258 94 aa24.65■■□□□ 1.54
CUL4A-209ENST00000488558 KINO60870 393 aaKnown RBP24.64■■□□□ 1.54
CUL4A-209ENST00000488558 BDNFP23560 247 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 ANXA13P27216 316 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 SOX9P48436 509 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 NCOA4Q13772 614 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 PPP2R5DQ14738 602 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 ZACNQ401N2 412 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 ZNF667Q5HYK9 610 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 MDH1BQ5I0G3 518 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 DGKKQ5KSL6 1271 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 DENND5BQ6ZUT9 1274 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 ADSSL1Q8N142 457 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 ZBTB44Q8NCP5 570 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 CCDC34Q96HJ3 373 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 C8orf48Q96LL4 319 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 TTLL2Q9BWV7 592 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 ZSCAN32Q9NX65 697 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 NXF1Q9UBU9 619 aaKnown RBP24.64■■□□□ 1.54
CUL4A-209ENST00000488558 FRMD4BQ9Y2L6 1034 aa24.64■■□□□ 1.54
CUL4A-209ENST00000488558 TRAV19A0A0A6YYK7 116 aa24.63■■□□□ 1.53
CUL4A-209ENST00000488558 IKBKBO14920 756 aa24.63■■□□□ 1.53
CUL4A-209ENST00000488558 USP17L7P0C7H9 530 aa24.63■■□□□ 1.53
CUL4A-209ENST00000488558 PFKLP17858 780 aa24.63■■□□□ 1.53
CUL4A-209ENST00000488558 PTPN1P18031 435 aaKnown RBP24.63■■□□□ 1.53
CUL4A-209ENST00000488558 GRIK1P39086 918 aa24.63■■□□□ 1.53
CUL4A-209ENST00000488558 PDE6CP51160 858 aa24.63■■□□□ 1.53
CUL4A-209ENST00000488558 CCR3P51677 355 aa24.63■■□□□ 1.53
CUL4A-209ENST00000488558 NOP14P78316 857 aaKnown RBP24.63■■□□□ 1.53
CUL4A-209ENST00000488558 FAM160A1Q05DH4 1040 aa24.63■■□□□ 1.53
CUL4A-209ENST00000488558 TXNDC11Q6PKC3 985 aa24.63■■□□□ 1.53
CUL4A-209ENST00000488558 GUF1Q8N442 669 aaKnown RBP24.63■■□□□ 1.53
CUL4A-209ENST00000488558 B3GALNT2Q8NCR0 500 aa24.63■■□□□ 1.53
CUL4A-209ENST00000488558 TAF4BQ92750 862 aa24.63■■□□□ 1.53
CUL4A-209ENST00000488558 GVINP1Q7Z2Y8 2422 aa24.62■■□□□ 1.53
CUL4A-209ENST00000488558 A8MXQ7 604 aa24.62■■□□□ 1.53
CUL4A-209ENST00000488558 ZNF202O95125 648 aa24.62■■□□□ 1.53
CUL4A-209ENST00000488558 VNN1O95497 513 aa24.62■■□□□ 1.53
CUL4A-209ENST00000488558 TCF3P15923 654 aa24.62■■□□□ 1.53
CUL4A-209ENST00000488558 ENPEPQ07075 957 aa24.62■■□□□ 1.53
CUL4A-209ENST00000488558 TNK2Q07912 1038 aa24.62■■□□□ 1.53
CUL4A-209ENST00000488558 DPEP3Q9H4B8 488 aa24.62■■□□□ 1.53
CUL4A-209ENST00000488558 SMYD3Q9H7B4 428 aa24.62■■□□□ 1.53
CUL4A-209ENST00000488558 GKN1Q9NS71 199 aa24.62■■□□□ 1.53
CUL4A-209ENST00000488558 ZNF292O60281 2723 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 LILRB5O75023 590 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 CKMP06732 381 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 TDGF1P13385 188 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 P4HA1P13674 534 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 PPP3CCP48454 512 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 DLG4P78352 724 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 USP4Q13107 963 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 RUNX3Q13761 415 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 PDGFRLQ15198 375 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 CEP135Q66GS9 1140 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 CC2D1AQ6P1N0 951 aaPredicted RBP24.61■■□□□ 1.53
CUL4A-209ENST00000488558 SYNPOQ8N3V7 929 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 SPEM1Q8N4L4 309 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 ATRIPQ8WXE1 791 aa24.61■■□□□ 1.53
CUL4A-209ENST00000488558 TRPC7Q9HCX4 862 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms