RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 ARL14EPQ8N8R7 260 aaPredicted RBP10□□□□□ -0.81
COL17A1-207ENST00000488320 FSIP1Q8NA03 581 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 STKLD1Q8NE28 680 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 BICD1Q96G01 975 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 CRELD1Q96HD1 420 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 PNKPQ96T60 521 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 PYM1Q9BRP8 204 aaKnown RBP10□□□□□ -0.81
COL17A1-207ENST00000488320 TMEM206Q9H813 350 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 RPF1Q9H9Y2 349 aaKnown RBP10□□□□□ -0.81
COL17A1-207ENST00000488320 ZDHHC4Q9NPG8 344 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 DDX19AQ9NUU7 478 aaKnown RBP10□□□□□ -0.81
COL17A1-207ENST00000488320 KCNG1Q9UIX4 513 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 DNM3Q9UQ16 869 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 PTPRBP23467 1997 aa10□□□□□ -0.81
COL17A1-207ENST00000488320 HELZ2Q9BYK8 2649 aaKnown RBP9.99□□□□□ -0.81
COL17A1-207ENST00000488320 A0A1W2PQD8 194 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 TRABD2BA6NFA1 517 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 GOLGA8CPA6NN73 597 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 TK2O00142 265 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 CYP11A1P05108 521 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 PLA2G2AP14555 144 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 GNSP15586 552 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 HDCP19113 662 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 TNFSF9P41273 254 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 ABCG1P45844 678 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 RPL10AP62906 217 aaKnown RBP9.99□□□□□ -0.81
COL17A1-207ENST00000488320 IRX6P78412 446 aaPredicted RBP9.99□□□□□ -0.81
COL17A1-207ENST00000488320 TSPY1Q01534 308 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 USP4Q13107 963 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 KCNB1Q14721 858 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 ZNF174Q15697 407 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 KYAT1Q16773 422 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 DDR2Q16832 855 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 SPATA1Q5VX52 437 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 C9orf57Q5W0N0 161 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 SCUBE3Q8IX30 993 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 DIS3L2Q8IYB7 885 aaKnown RBP9.99□□□□□ -0.81
COL17A1-207ENST00000488320 IL17RCQ8NAC3 791 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 PIP4K2CQ8TBX8 421 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 SLC22A12Q96S37 553 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 KIF2CQ99661 725 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 C17orf75Q9HAS0 396 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 RAI2Q9Y5P3 530 aa9.99□□□□□ -0.81
COL17A1-207ENST00000488320 PLXND1Q9Y4D7 1925 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 MYH11P35749 1972 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 E9PMD0 336 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 TULP1O00294 542 aaPredicted RBP9.98□□□□□ -0.81
COL17A1-207ENST00000488320 NDUFS2O75306 463 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 KAT7O95251 611 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 OR52Z1P0C646 297 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 TNFRSF4P43489 277 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 RAD51AP2Q09MP3 1159 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 NFE2Q16621 373 aaPredicted RBP9.98□□□□□ -0.81
COL17A1-207ENST00000488320 ZC2HC1CQ53FD0 456 aaPredicted RBP9.98□□□□□ -0.81
COL17A1-207ENST00000488320 SYCP2LQ5T4T6 812 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 JADE1Q6IE81 842 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 ZPBP2Q6X784 338 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 TMPRSS7Q7RTY8 843 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 SKAP1Q86WV1 359 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 DAW1Q8N136 415 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 TRIML1Q8N9V2 468 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 SPATA18Q8TC71 538 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 LRRC15Q8TF66 581 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 YTHDC1Q96MU7 727 aaKnown RBP9.98□□□□□ -0.81
COL17A1-207ENST00000488320 TSPAN18Q96SJ8 248 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 FAM124BQ9H5Z6 455 aaPredicted RBP9.98□□□□□ -0.81
COL17A1-207ENST00000488320 ARHGEF4Q9NR80 690 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 KIAA1522Q9P206 1035 aaPredicted RBP9.98□□□□□ -0.81
COL17A1-207ENST00000488320 DKK4Q9UBT3 224 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 LRWD1Q9UFC0 647 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 SUSD2Q9UGT4 822 aa9.98□□□□□ -0.81
COL17A1-207ENST00000488320 PCDH15Q96QU1 1955 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 MYO18AQ92614 2054 aaKnown RBP9.97□□□□□ -0.81
COL17A1-207ENST00000488320 A0A087WV48 116 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 C2orf78A6NCI8 922 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 TBC1D3BA6NDS4 549 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 CYSRT1A8MQ03 144 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 HAX1O00165 279 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 PIRO00625 290 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 CAPN9O14815 690 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 ATXN7O15265 892 aaPredicted RBP9.97□□□□□ -0.81
COL17A1-207ENST00000488320 PFKFB2O60825 505 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 NOL4O94818 638 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 REC8O95072 547 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 CYP2F1P24903 491 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 GRIA2P42262 883 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 TAF6P49848 677 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 LIG4P49917 911 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 PDE6CP51160 858 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 ATP2C1P98194 919 aaPredicted RBP9.97□□□□□ -0.81
COL17A1-207ENST00000488320 KDSRQ06136 332 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 RESTQ13127 1097 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 TMEM132DQ14C87 1099 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 ENOX2Q16206 610 aaKnown RBP9.97□□□□□ -0.81
COL17A1-207ENST00000488320 WSCD1Q658N2 575 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 LARP1BQ659C4 914 aaKnown RBP9.97□□□□□ -0.81
COL17A1-207ENST00000488320 RINT1Q6NUQ1 792 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 LRRC69Q6ZNQ3 347 aa9.97□□□□□ -0.81
COL17A1-207ENST00000488320 TRMT11Q7Z4G4 463 aaKnown RBP9.97□□□□□ -0.81
COL17A1-207ENST00000488320 FILIP1Q7Z7B0 1213 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms