RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 SMARCD1Q96GM5 515 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 ERGIC2Q96RQ1 377 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 HNRNPABQ99729 332 aaKnown RBP16.7■□□□□ 0.26
C9orf3-219ENST00000488186 CORO1BQ9BR76 489 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 ZNF518BQ9C0D4 1074 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 SIX2Q9NPC8 291 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 HESX1Q9UBX0 185 aa16.7■□□□□ 0.26
C9orf3-219ENST00000488186 A0A1B0GTH6 734 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 TEX33O43247 280 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 CBFA2T2O43439 604 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 UCHL3P15374 230 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 KLK7P49862 253 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 POLR2FP61218 127 aaKnown RBP16.69■□□□□ 0.26
C9orf3-219ENST00000488186 PPP1R26Q5T8A7 1209 aaPredicted RBP16.69■□□□□ 0.26
C9orf3-219ENST00000488186 CACNA2D4Q7Z3S7 1137 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 FAM35AQ86V20 835 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 UBR7Q8N806 425 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 GPR152Q8TDT2 470 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 NAP1L5Q96NT1 182 aaPredicted RBP16.69■□□□□ 0.26
C9orf3-219ENST00000488186 SPAG5Q96R06 1193 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 ASAH2Q9NR71 780 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 EHD2Q9NZN4 543 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 IFNKQ9P0W0 207 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 MAGED2Q9UNF1 606 aaPredicted RBP16.69■□□□□ 0.26
C9orf3-219ENST00000488186 DAAM1Q9Y4D1 1078 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 FHOD1Q9Y613 1164 aa16.69■□□□□ 0.26
C9orf3-219ENST00000488186 C5orf42Q9H799 3197 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 MUC3AQ02505 3323 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 F8VP50 259 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 ZNF197O14709 1029 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 CSH1P0DML2 217 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 CSH2P0DML3 217 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 MYL4P12829 197 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 GPR15P49685 360 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 BPIFB4P59827 614 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 PTK2Q05397 1052 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 DRAP1Q14919 205 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-219ENST00000488186 NR1I3Q14994 352 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 STILQ15468 1287 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 PABPC1LQ4VXU2 614 aaKnown RBP16.68■□□□□ 0.26
C9orf3-219ENST00000488186 SDHAF4Q5VUM1 108 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 PDZD4Q76G19 769 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-219ENST00000488186 DNAJB7Q7Z6W7 309 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-219ENST00000488186 FUKQ8N0W3 1084 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 PSMG2Q969U7 264 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 STK33Q9BYT3 514 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 WDR6Q9NNW5 1121 aaKnown RBP16.68■□□□□ 0.26
C9orf3-219ENST00000488186 DMAP1Q9NPF5 467 aaPredicted RBP16.68■□□□□ 0.26
C9orf3-219ENST00000488186 NLRC4Q9NPP4 1024 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 KRT82Q9NSB4 513 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 CEP72Q9P209 647 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 DNMT3BQ9UBC3 853 aaKnown RBP16.68■□□□□ 0.26
C9orf3-219ENST00000488186 SIK3Q9Y2K2 1263 aa16.68■□□□□ 0.26
C9orf3-219ENST00000488186 C19orf67A6NJJ6 358 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 RNF225M0QZC1 329 aaPredicted RBP16.67■□□□□ 0.26
C9orf3-219ENST00000488186 FOXN3O00409 490 aaPredicted RBP16.67■□□□□ 0.26
C9orf3-219ENST00000488186 MED7O43513 233 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 FGF19O95750 216 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 RHOP08100 348 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 ATF6P18850 670 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 FSHRP23945 695 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 MAP3K7CLP57077 242 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 GOLGA7BQ2TAP0 167 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 ARHGAP17Q68EM7 881 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 SMYD5Q6GMV2 418 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 PAQR9Q6ZVX9 377 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 ADHFE1Q8IWW8 467 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 LEMD2Q8NC56 503 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 ADAMTS19Q8TE59 1207 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 SHC3Q92529 594 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 C8orf48Q96LL4 319 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 CEP295NLQ96MC4 621 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 GCNAQ96QF7 691 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 HCFC1R1Q9NWW0 138 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 CDH22Q9UJ99 828 aa16.67■□□□□ 0.26
C9orf3-219ENST00000488186 MRPS23Q9Y3D9 190 aaKnown RBP16.67■□□□□ 0.26
C9orf3-219ENST00000488186 C2orf16Q68DN1 1984 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 A0A1W2PQC6 194 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 SLC38A8A6NNN8 435 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 CYP26A1O43174 497 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 THAP12O43422 761 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 IL9P15248 144 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 GNA15P30679 374 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 NTHL1P78549 312 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 IFRD2Q12894 506 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-219ENST00000488186 DENND5BQ6ZUT9 1274 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 HS6ST3Q8IZP7 471 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 ACSF2Q96CM8 615 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-219ENST00000488186 SPATA17Q96L03 361 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 KCNK16Q96T55 309 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 PHF7Q9BWX1 381 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-219ENST00000488186 DUSP16Q9BY84 665 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 GANQ9H2C0 597 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 PDCL3Q9H2J4 239 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 POMKQ9H5K3 350 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 UXTQ9UBK9 157 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-219ENST00000488186 CNTN6Q9UQ52 1028 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 USTQ9Y2C2 406 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 NR2E1Q9Y466 385 aa16.66■□□□□ 0.26
C9orf3-219ENST00000488186 CLUHO75153 1309 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms