RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 SRSF4Q08170 494 aaKnown RBP3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 IFIT5Q13325 482 aaKnown RBP3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 HDAC1Q13547 482 aaPredicted RBP3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 PMS2P11Q13670 270 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 DAG1Q14118 895 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 CYP2A13Q16696 494 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 CD300EQ496F6 205 aaPredicted RBP3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 KIAA1614Q5VZ46 1190 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 FAM160B1Q5W0V3 765 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 LMBRD2Q68DH5 695 aaPredicted RBP3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 HIBCHQ6NVY1 386 aaPredicted RBP3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 GRASPQ7Z6J2 395 aaPredicted RBP3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 ZNF280BQ86YH2 543 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 SPICE1Q8N0Z3 855 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 OR2C3Q8N628 320 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 SAMD3Q8N6K7 520 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 POC1BQ8TC44 478 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 SUCLG2Q96I99 432 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 CCDC138Q96M89 665 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 ZNF778Q96MU6 729 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 SMOQ99835 787 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 MYD88Q99836 296 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 REXO4Q9GZR2 422 aaKnown RBP3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 DAAM1Q9Y4D1 1078 aa3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 POLR2AP24928 1970 aaKnown RBP3.52□□□□□ -1.85
R3HDM1-219ENST00000488035 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 TOR1BO14657 336 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 ERN1O75460 977 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 IL18RAPO95256 599 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 THP07101 528 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 PARP1P09874 1014 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 HTR3AP46098 478 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 LILRA4P59901 499 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 SIM1P81133 766 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 ZNF844Q08AG5 666 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 SCAPQ12770 1279 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 RESTQ13127 1097 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 BIRC2Q13490 618 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 RAB32Q13637 225 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 BRD3Q15059 726 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 LONRF3Q496Y0 759 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 FAM209BQ5JX69 171 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 C10orf62Q5T681 223 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 TOGARAM2Q6ZUX3 1019 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 UNC13DQ70J99 1090 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 FAM186BQ8IYM0 893 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 ADGRG5Q8IZF4 528 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 CCDC33Q8N5R6 958 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 DDX17Q92841 729 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 TMEM125Q96AQ2 219 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 RNF31Q96EP0 1072 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 SNX22Q96L94 193 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 MESP1Q9BRJ9 268 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 STK31Q9BXU1 1019 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 ALOXE3Q9BYJ1 711 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 UNKQ9C0B0 810 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 ZNF518BQ9C0D4 1074 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 MS4A7Q9GZW8 240 aaPredicted RBP3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 CHST8Q9H2A9 424 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 PNPLA8Q9NP80 782 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 NLRC4Q9NPP4 1024 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 SLC17A6Q9P2U8 582 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 KCNE5Q9UJ90 142 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 DMTF1Q9Y222 760 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 MTO1Q9Y2Z2 717 aaKnown RBP3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 TMX2Q9Y320 296 aa3.51□□□□□ -1.85
R3HDM1-219ENST00000488035 ARHGEF17Q96PE2 2063 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 A0A087WZ62 844 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 A0A1W2PPC4 97 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 A0A1W2PS29 197 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 hCG_1984214I3L0E3 225 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 CDKL5O76039 1030 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 LDHAP00338 332 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 MT-ND5P03915 603 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 HARSP12081 509 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 RPL17P18621 184 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 ABCB4P21439 1286 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 GATA3P23771 443 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 VIPR2P41587 438 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 GCLCP48506 637 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 ANXA11P50995 505 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 PIGFQ07326 219 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 SPDYE7PQ495Y7 208 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 VPS53Q5VIR6 699 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 RRAGBQ5VZM2 374 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 TMEM108Q6UXF1 575 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 KCTD20Q7Z5Y7 419 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 C11orf96Q7Z7L8 435 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 VPS37AQ8NEZ2 397 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 TNIP3Q96KP6 325 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 UNKLQ9H9P5 680 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 A1CFQ9NQ94 594 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 ZNF70Q9UC06 446 aaPredicted RBP3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 MID2Q9UJV3 735 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 CDC23Q9UJX2 597 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 MRPS17Q9Y2R5 130 aaKnown RBP3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 PCDHGB2Q9Y5G2 931 aa3.5□□□□□ -1.85
R3HDM1-219ENST00000488035 RAD54BQ9Y620 910 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms