RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 NR2E1Q9Y466 385 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 F8VP50 259 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 TMEM189-UBE2V1I3L0A0 370 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 KRIT1O00522 736 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 ENPP3O14638 875 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 ATP2C2O75185 946 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 B3GAT3O94766 335 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 ODC1P11926 461 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 TCF4P15884 667 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 ACAT1P24752 427 aaKnown RBP9.95□□□□□ -0.82
SF3B1-211ENST00000487698 ADORA2BP29275 332 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 PLA2G4AP47712 749 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 RGS7P49802 495 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 ATN1P54259 1190 aaPredicted RBP9.95□□□□□ -0.82
SF3B1-211ENST00000487698 SEL1L2Q5TEA6 688 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 LRRC38Q5VT99 294 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 DSTYKQ6XUX3 929 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 PAQR9Q6ZVX9 377 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 HDAC7Q8WUI4 952 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 SEPT8Q92599 483 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 KRT12Q99456 494 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 RTP3Q9BQQ7 232 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 ST7Q9NRC1 585 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 TBC1D13Q9NVG8 400 aa9.95□□□□□ -0.82
SF3B1-211ENST00000487698 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.95□□□□□ -0.82
SF3B1-211ENST00000487698 F8W810 466 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 PAPSS1O43252 624 aaPredicted RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 DDHD2O94830 711 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 ITGB1P05556 798 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 HSPA8P11142 646 aaKnown RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 BRCC3P46736 316 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 TLE2Q04725 743 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 SIX1Q15475 284 aaPredicted RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 LONRF2Q1L5Z9 754 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 TRIM60Q495X7 471 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 FAM102AQ5T9C2 384 aaPredicted RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 CCDC70Q6NSX1 233 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 TRNP1Q6NT89 227 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 DCLRE1AQ6PJP8 1040 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 ZNF280BQ86YH2 543 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 SLC13A5Q86YT5 568 aaPredicted RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 ZDHHC17Q8IUH5 632 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 COLGALT2Q8IYK4 626 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 ZDHHC14Q8IZN3 488 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 ARFGAP1Q8N6T3 406 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 EMC1Q8N766 993 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 URGCPQ8TCY9 931 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 DIS3LQ8TF46 1054 aaKnown RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 HNRNPLLQ8WVV9 542 aaKnown RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 RSPH1Q8WYR4 309 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 SUSD3Q96L08 255 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 SYT15Q9BQS2 421 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 HIPK3Q9H422 1215 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 SLITRK6Q9H5Y7 841 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 ZNF446Q9NWS9 450 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 STIM2Q9P246 746 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 DMGDHQ9UI17 866 aaKnown RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 TIMM13Q9Y5L4 95 aaPredicted RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 C2CD4BA6NLJ0 364 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 DCDC2CA8MYV0 355 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 I3L4J1 428 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 FSCN2O14926 492 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 XPO1O14980 1071 aaKnown RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 LRCH4O75427 683 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 PARNO95453 639 aaKnown RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 PSMA2P25787 234 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 SCNN1AP37088 669 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 SNX16P57768 344 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 C1QTNF8P60827 252 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 PLCB3Q01970 1234 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 PAN2Q504Q3 1202 aaKnown RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 MDH1BQ5I0G3 518 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 OR6B2Q6IFH4 312 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 CC2D1AQ6P1N0 951 aaPredicted RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 POLNQ7Z5Q5 900 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 EXD1Q8NHP7 514 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 KHSRPQ92945 711 aaKnown RBP eCLIP9.94□□□□□ -0.825e-10■■■■□ 23.9
SF3B1-211ENST00000487698 SCLYQ96I15 445 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 HSFY1Q96LI6 401 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 PKMYT1Q99640 499 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 PLVAPQ9BX97 442 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 DUSP16Q9BY84 665 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 B3GNT5Q9BYG0 378 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 DDX47Q9H0S4 455 aaKnown RBP9.94□□□□□ -0.82
SF3B1-211ENST00000487698 KANSL3Q9P2N6 904 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 TBX21Q9UL17 535 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 CDH9Q9ULB4 789 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 USTQ9Y2C2 406 aa9.94□□□□□ -0.82
SF3B1-211ENST00000487698 COL4A4P53420 1690 aaPredicted RBP9.93□□□□□ -0.82
SF3B1-211ENST00000487698 COL4A6Q14031 1691 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.93□□□□□ -0.82
SF3B1-211ENST00000487698 TCRBV7S2A1N4TA0A589 114 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 BHMG1C9JSJ3 638 aaPredicted RBP9.93□□□□□ -0.82
SF3B1-211ENST00000487698 PIK3R2O00459 728 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 DPYSL4O14531 572 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 SART1O43290 800 aaKnown RBP9.93□□□□□ -0.82
SF3B1-211ENST00000487698 RAD51CO43502 376 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 ZRANB2O95218 330 aaKnown RBP eCLIP9.93□□□□□ -0.82
SF3B1-211ENST00000487698 NPR3P17342 541 aa9.93□□□□□ -0.82
SF3B1-211ENST00000487698 TYMPP19971 482 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms