RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 MTMR12Q9C0I1 747 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 EBF3Q9H4W6 596 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 TMEM206Q9H813 350 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 GKN1Q9NS71 199 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 SEMA4GQ9NTN9 838 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 GDAP2Q9NXN4 497 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 DDX43Q9NXZ2 648 aaKnown RBP9.17□□□□□ -0.94
PRKCB-208ENST00000487674 MAGED2Q9UNF1 606 aaPredicted RBP9.17□□□□□ -0.94
PRKCB-208ENST00000487674 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.17□□□□□ -0.94
PRKCB-208ENST00000487674 ACACBO00763 2458 aa9.17□□□□□ -0.94
PRKCB-208ENST00000487674 PTPRDP23468 1912 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 ANAPC1Q9H1A4 1944 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 CCDC163A0A0D9SF12 145 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.16□□□□□ -0.94
PRKCB-208ENST00000487674 GOLGA8IPA6NC78 632 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 OTOL1A6NHN0 477 aaPredicted RBP9.16□□□□□ -0.94
PRKCB-208ENST00000487674 GOLGA8JA6NMD2 632 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 TRDMT1O14717 391 aaKnown RBP9.16□□□□□ -0.94
PRKCB-208ENST00000487674 GABRDO14764 452 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 SLC30A4O14863 429 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 KIAA0391O15091 583 aaKnown RBP9.16□□□□□ -0.94
PRKCB-208ENST00000487674 ATG13O75143 517 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 TADA3O75528 432 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 KRT19P08727 400 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 TMEM191BP0C7N4 346 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 ACAT1P24752 427 aaKnown RBP9.16□□□□□ -0.94
PRKCB-208ENST00000487674 PCSK1P29120 753 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 LHX1P48742 406 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 RBP5P82980 135 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 MYO1EQ12965 1108 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 USP4Q13107 963 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 MTF1Q14872 753 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 SDHAF4Q5VUM1 108 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 TRIM68Q6AZZ1 485 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 NUDT18Q6ZVK8 323 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 STXBP4Q6ZWJ1 553 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 SPATA2LQ8IUW3 424 aaPredicted RBP9.16□□□□□ -0.94
PRKCB-208ENST00000487674 GPD1LQ8N335 351 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 CPA6Q8N4T0 437 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 FAM160A2Q8N612 972 aaPredicted RBP9.16□□□□□ -0.94
PRKCB-208ENST00000487674 CSGALNACT2Q8N6G5 542 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 STKLD1Q8NE28 680 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 ZSWIM2Q8NEG5 633 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 RIN3Q8TB24 985 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 GAB3Q8WWW8 586 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 EXOC4Q96A65 974 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 FUBP3Q96I24 572 aaKnown RBP eCLIP9.16□□□□□ -0.94
PRKCB-208ENST00000487674 MYRFLQ96LU7 910 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 FGFBP2Q9BYJ0 223 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 PDE11AQ9HCR9 933 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 PANK4Q9NVE7 773 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 SIX4Q9UIU6 781 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 SNX9Q9Y5X1 595 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 CACNA1BQ00975 2339 aa9.16□□□□□ -0.94
PRKCB-208ENST00000487674 EML5Q05BV3 1969 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 MYO16Q9Y6X6 1858 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 A0A087X0B3 334 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 TRAV19A0A0A6YYK7 116 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 DCDC2BA2VCK2 349 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 TULP1O00294 542 aaPredicted RBP9.15□□□□□ -0.94
PRKCB-208ENST00000487674 RPP40O75818 363 aaKnown RBP9.15□□□□□ -0.94
PRKCB-208ENST00000487674 AKAP3O75969 853 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 USP17L7P0C7H9 530 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 ARSAP15289 507 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 SYT1P21579 422 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 DRD1P21728 446 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 CYP2F1P24903 491 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 MAGEA11P43364 429 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 CEBPZQ03701 1054 aaKnown RBP9.15□□□□□ -0.94
PRKCB-208ENST00000487674 FAM160A1Q05DH4 1040 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 SLC39A14Q15043 492 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 ZNF77Q15935 545 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 DDR2Q16832 855 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 CCDC142Q17RM4 750 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 SOWAHAQ2M3V2 549 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 FBXO43Q4G163 708 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 FAM173BQ6P4H8 233 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 PKN3Q6P5Z2 889 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 C4orf50Q6ZRC1 276 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 DPH6Q7L8W6 267 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 OSTM1Q86WC4 334 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 CCDC65Q8IXS2 484 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 NOC3LQ8WTT2 800 aaKnown RBP9.15□□□□□ -0.94
PRKCB-208ENST00000487674 ATP2A3Q93084 1043 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 ANKRD36BP1Q96IX9 119 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 LOXL4Q96JB6 756 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 FAM84AQ96KN4 292 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 P2RY13Q9BPV8 354 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 TNMDQ9H2S6 317 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 TRPC7Q9HCX4 862 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 INTS13Q9NVM9 706 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 GTF3C4Q9UKN8 822 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 SLC8A2Q9UPR5 921 aa9.15□□□□□ -0.94
PRKCB-208ENST00000487674 R3HCC1Q9Y3T6 440 aaKnown RBP9.15□□□□□ -0.94
PRKCB-208ENST00000487674 PTPRJQ12913 1337 aa9.14□□□□□ -0.95
PRKCB-208ENST00000487674 HCRTO43612 131 aa9.14□□□□□ -0.95
PRKCB-208ENST00000487674 RNF40O75150 1001 aa9.14□□□□□ -0.95
PRKCB-208ENST00000487674 PRPF6O94906 941 aaKnown RBP9.14□□□□□ -0.95
PRKCB-208ENST00000487674 EPN2O95208 641 aa9.14□□□□□ -0.95
PRKCB-208ENST00000487674 EGFP01133 1207 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms