RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 ECHDC2Q86YB7 292 aa21.44■■□□□ 1.02
PHF1-209ENST00000487667 CPNE8Q86YQ8 564 aa21.44■■□□□ 1.02
PHF1-209ENST00000487667 PRDM4Q9UKN5 801 aa21.44■■□□□ 1.02
PHF1-209ENST00000487667 HTTP42858 3142 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 MGEA5O60502 916 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 FGFR1P11362 822 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 PCK1P35558 622 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 TNNT3P45378 269 aaPredicted RBP21.43■■□□□ 1.02
PHF1-209ENST00000487667 RPL34P49207 117 aaKnown RBP21.43■■□□□ 1.02
PHF1-209ENST00000487667 SCNN1GP51170 649 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 ZNF143P52747 638 aaPredicted RBP21.43■■□□□ 1.02
PHF1-209ENST00000487667 ZNF252P-AS1Q0IIN9 211 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 SMC1AQ14683 1233 aaKnown RBP21.43■■□□□ 1.02
PHF1-209ENST00000487667 OR6B2Q6IFH4 312 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 SYDE1Q6ZW31 735 aaPredicted RBP21.43■■□□□ 1.02
PHF1-209ENST00000487667 ARCQ7LC44 396 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 TTC30AQ86WT1 665 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 B3GALNT2Q8NCR0 500 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 GRK7Q8WTQ7 553 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 LPPQ93052 612 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 SENP8Q96LD8 212 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 HNRNPABQ99729 332 aaKnown RBP21.43■■□□□ 1.02
PHF1-209ENST00000487667 FAM129AQ9BZQ8 928 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 TRPV6Q9H1D0 765 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 FAM49BQ9NUQ9 324 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 DSEQ9UL01 958 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 EFR3BQ9Y2G0 817 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 E5RJQ4 531 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 F8VP50 259 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 GJB6O95452 261 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 PDGFRBP09619 1106 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 AARSP49588 968 aaKnown RBP eCLIP21.43■■□□□ 1.021e-5■■□□□ 14
PHF1-209ENST00000487667 TUSC3Q13454 348 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 UPP1Q16831 310 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 AADACL2Q6P093 401 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 CCDC137Q6PK04 289 aaKnown RBP21.43■■□□□ 1.02
PHF1-209ENST00000487667 DSTYKQ6XUX3 929 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 SLC24A5Q71RS6 500 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 SLCO2A1Q92959 643 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 CNPY3Q9BT09 278 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 OSBPL8Q9BZF1 889 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 RNF19AQ9NV58 838 aa21.43■■□□□ 1.02
PHF1-209ENST00000487667 MEIS3P2A8K0S8 358 aa21.42■■□□□ 1.02
PHF1-209ENST00000487667 TJP3O95049 919 aa21.42■■□□□ 1.02
PHF1-209ENST00000487667 RARAP10276 462 aa21.42■■□□□ 1.02
PHF1-209ENST00000487667 GPD1P21695 349 aa21.42■■□□□ 1.02
PHF1-209ENST00000487667 COILP38432 576 aaPredicted RBP21.42■■□□□ 1.02
PHF1-209ENST00000487667 SLC6A3Q01959 620 aa21.42■■□□□ 1.02
PHF1-209ENST00000487667 OGDHQ02218 1023 aa21.42■■□□□ 1.02
PHF1-209ENST00000487667 ZFYVE27Q5T4F4 411 aa21.42■■□□□ 1.02
PHF1-209ENST00000487667 ADAT2Q7Z6V5 191 aaKnown RBP21.42■■□□□ 1.02
PHF1-209ENST00000487667 ZNF598Q86UK7 904 aaKnown RBP21.42■■□□□ 1.02
PHF1-209ENST00000487667 IFT81Q8WYA0 676 aa21.42■■□□□ 1.02
PHF1-209ENST00000487667 ERP44Q9BS26 406 aa21.42■■□□□ 1.02
PHF1-209ENST00000487667 UNC93B1Q9H1C4 597 aa21.42■■□□□ 1.02
PHF1-209ENST00000487667 NME7Q9Y5B8 376 aa21.42■■□□□ 1.02
PHF1-209ENST00000487667 TTI1O43156 1089 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 ODC1P11926 461 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 SELPP16109 830 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 PCSK1P29120 753 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 CDK7P50613 346 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 CLCNKBP51801 687 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 PDE4CQ08493 712 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 SIX1Q15475 284 aaPredicted RBP21.41■■□□□ 1.02
PHF1-209ENST00000487667 METTL23Q86XA0 190 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 CCDC105Q8IYK2 499 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 CASKIN2Q8WXE0 1202 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 DPEP3Q9H4B8 488 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 MIOSQ9NXC5 875 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 KANSL3Q9P2N6 904 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 NR2E1Q9Y466 385 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 DPYSL4O14531 572 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 XPO1O14980 1071 aaKnown RBP21.41■■□□□ 1.02
PHF1-209ENST00000487667 SASH3O75995 380 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 KRT1P04264 644 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 MYBL2P10244 700 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 HSPA8P11142 646 aaKnown RBP21.41■■□□□ 1.02
PHF1-209ENST00000487667 PTPN1P18031 435 aaKnown RBP21.41■■□□□ 1.02
PHF1-209ENST00000487667 LMO2P25791 158 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 CARSP49589 748 aaKnown RBP21.41■■□□□ 1.02
PHF1-209ENST00000487667 LMNB2Q03252 620 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 PMF1Q6P1K2 205 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 TRAF7Q6Q0C0 670 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 GLB1LQ6UWU2 654 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 FAM183BPQ6ZVS7 135 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 RNF169Q8NCN4 708 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 JOSD2Q8TAC2 188 aa21.41■■□□□ 1.02
PHF1-209ENST00000487667 C2CD4BA6NLJ0 364 aa21.4■■□□□ 1.02
PHF1-209ENST00000487667 FAM189BP81408 668 aa21.4■■□□□ 1.02
PHF1-209ENST00000487667 MRPS25P82663 173 aaKnown RBP21.4■■□□□ 1.02
PHF1-209ENST00000487667 PLCB3Q01970 1234 aa21.4■■□□□ 1.02
PHF1-209ENST00000487667 KLF1Q13351 362 aaPredicted RBP21.4■■□□□ 1.02
PHF1-209ENST00000487667 CCNG2Q16589 344 aa21.4■■□□□ 1.02
PHF1-209ENST00000487667 WSCD1Q658N2 575 aa21.4■■□□□ 1.02
PHF1-209ENST00000487667 LRRC8DQ7L1W4 858 aa21.4■■□□□ 1.02
PHF1-209ENST00000487667 JAMLQ86YT9 394 aa21.4■■□□□ 1.02
PHF1-209ENST00000487667 DUSP16Q9BY84 665 aa21.4■■□□□ 1.02
PHF1-209ENST00000487667 PAK6Q9NQU5 681 aaPredicted RBP21.4■■□□□ 1.02
PHF1-209ENST00000487667 TJP2Q9UDY2 1190 aa21.4■■□□□ 1.02
PHF1-209ENST00000487667 CDH9Q9ULB4 789 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms