RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, human

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-234	ENST00000487604	PNLDC1	Q8NA58	520 aa	Known RBP	4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	C8orf58	Q8NAV2	365 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	ZCRB1	Q8TBF4	217 aa	Known RBP	4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	XAGE5	Q8WWM1	108 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	ZBTB9	Q96C00	473 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	HOOK2	Q96ED9	719 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	C5orf34	Q96MH7	638 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	CAMKK2	Q96RR4	588 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	MESP1	Q9BRJ9	268 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	PRSS22	Q9GZN4	317 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	SLC12A5	Q9H2X9	1139 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	CXorf36	Q9H7Y0	433 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	AASDHPPT	Q9NRN7	309 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	GABRQ	Q9UN88	632 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	TMX2	Q9Y320	296 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	ZNF521	Q96K83	1311 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604	CACNA1I	Q9P0X4	2223 aa		4.6	□□□□□ -1.67
RBM39-234	ENST00000487604		A0A088AWK7	358 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	ABLIM3	O94929	683 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	PDE8B	O95263	885 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	TOP3B	O95985	862 aa	Known RBP	4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	TH	P07101	528 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	CYP2C9	P11712	490 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	CTGF	P29279	349 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	SLC11A2	P49281	568 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	NEK2	P51955	445 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	MAPK7	Q13164	816 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	TBC1D25	Q3MII6	688 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	ZIK1	Q3SY52	487 aa	Predicted RBP	4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	SLC9A4	Q6AI14	798 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	GALNT16	Q8N428	558 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	ABHD11	Q8NFV4	315 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	DENND1A	Q8TEH3	1009 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	SOCS4	Q8WXH5	440 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	RITA1	Q96K30	269 aa		4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	LENG8	Q96PV6	779 aa	Predicted RBP	4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	P2RX7	Q99572	595 aa	Known RBP	4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	CCNL1	Q9UK58	526 aa	Predicted RBP	4.59	□□□□□ -1.67
RBM39-234	ENST00000487604	CYP2D7	A0A087X1C5	515 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	KCNU1	A8MYU2	1149 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	AP1G1	O43747	822 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	OFD1	O75665	1012 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	IGKV2-30	P06310	120 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	ADORA2A	P29274	412 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	LRPAP1	P30533	357 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	PDE6C	P51160	858 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	TPTE	P56180	551 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	KRTAP10-9	P60411	292 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	GPSM2	P81274	684 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	DAZAP2	Q15038	168 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	LY6K	Q17RY6	165 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	IFIT1B	Q5T764	474 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	DEPDC1	Q5TB30	811 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	KIRREL2	Q6UWL6	708 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	SLC15A3	Q8IY34	581 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	DAZAP1	Q96EP5	407 aa	Known RBP	4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	BRINP2	Q9C0B6	783 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	STAP2	Q9UGK3	403 aa		4.58	□□□□□ -1.68
RBM39-234	ENST00000487604	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	4.58	□□□□□ -1.68
RBM39-234	ENST00000487604		A0A087WWL8	130 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604		H7C1Q1	480 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	MYO1C	O00159	1063 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	PPEF2	O14830	753 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	VNN1	O95497	513 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	BMP15	O95972	392 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	KCNA3	P22001	575 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	ARHGAP25	P42331	645 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	DGKE	P52429	567 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	ARFIP2	P53365	341 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	WNT3	P56703	355 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	RAB1A	P62820	205 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	GTF2H3	Q13889	308 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	FGL2	Q14314	439 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	PTPRO	Q16827	1216 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	L1TD1	Q5T7N2	865 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	MTHFD1L	Q6UB35	978 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	ABRA	Q8N0Z2	381 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	DNAJC5G	Q8N7S2	189 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	TERB1	Q8NA31	727 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	DIS3L	Q8TF46	1054 aa	Known RBP	4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	OSCP1	Q8WVF1	389 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	GPATCH3	Q96I76	525 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	SNX18	Q96RF0	628 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	SPRTN	Q9H040	489 aa	Predicted RBP	4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	ANLN	Q9NQW6	1124 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	PDGFC	Q9NRA1	345 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	CNNM1	Q9NRU3	951 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	TBC1D30	Q9Y2I9	924 aa		4.57	□□□□□ -1.68
RBM39-234	ENST00000487604	WDR17	Q8IZU2	1322 aa		4.56	□□□□□ -1.68
RBM39-234	ENST00000487604	POC1B-GALNT4	F8VUJ3	575 aa		4.56	□□□□□ -1.68
RBM39-234	ENST00000487604	EXOC3	O60645	756 aa		4.56	□□□□□ -1.68
RBM39-234	ENST00000487604	DLD	P09622	509 aa	Known RBP	4.56	□□□□□ -1.68
RBM39-234	ENST00000487604	XRCC6	P12956	609 aa	Known RBP eCLIP	4.56	□□□□□ -1.68
RBM39-234	ENST00000487604	NCL	P19338	710 aa	Known RBP	4.56	□□□□□ -1.68
RBM39-234	ENST00000487604	HTR1B	P28222	390 aa		4.56	□□□□□ -1.68
RBM39-234	ENST00000487604	SATB1	Q01826	763 aa		4.56	□□□□□ -1.68
RBM39-234	ENST00000487604	CYP1B1	Q16678	543 aa		4.56	□□□□□ -1.68
RBM39-234	ENST00000487604	CAND1	Q86VP6	1230 aa	Known RBP	4.56	□□□□□ -1.68
RBM39-234	ENST00000487604	GAS2L3	Q86XJ1	694 aa		4.56	□□□□□ -1.68
RBM39-234	ENST00000487604	IZUMO1	Q8IYV9	350 aa		4.56	□□□□□ -1.68

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